TRANSMI SS IBLE DRUG RESISTANCE, PLASMID CIIARACTERI ZATION IN SHIGELLA AND SALMONELLA, AND VIRDLENCE OF SHIGELLA ISOLATED FROM DIARRHOEIC HUMANS AND PIGLETS\ BY ISAAC ADEYEMI ADELEYE B.Sc. (Hons.) Lagos, M.Sc. (Microbiology) TFE. A TH$S4$ l^THE DEPARTMENT OF Vjj^ERINARY MICROBIOLOGY AND PARASITOLOGY, /^JWBMITTED TO THE TY OF VETERINARY MEDICINE C^IN PARTIAL FULFILMENT OF THE REQUIREMENTS FOR THE DEGREE OF DOCTOR OF PHILOSOPY (Ph.D) OF THE UNIVERSITY OF IBADAN MARCH, 1990 i ABSTRACT A total of 1U,200 faecal samples »ncluding 10,000 from diarrhoeic human beings and 200 from diarrhoeic ^i&iets were collected. The human faecal samples were collected from the three government hospitals in Ibadan, naraely: T^e University College Hospital, State Hospitallse 2 t Adeoyo and Ring Road, while the piglets were <-»n the Teaching and Research Farm, of the University oi lbauau. ................. - S T Thirty Shigella and twenty-two Salmone11a spp. were isolated from the human fae cat s amples while one Shigella isolate was obtained from the faecal samples of piglets. The Shigellae were sero1ogica 11y identified as £. y 1exner i (23 from humans and 1 from a piglet), £. d.vsenter iae (4 isolates from human) and S . bo.vdi i (3, all were isolated from human). Of the Salmone11a isolates, 9 were identified as S .typhi while the remaining 13 were classified as Salmone11a species. One microgram per ml potassium tellurite in MacConkey agar was used to enhance the isolation of Shigellae. Antimicrobial susceptibi1ity testing to eight antibiotics were peformed on the fifty -three bacterial isolates. Twenty-one antibiotic resistance patterns were identified. ii The highest pattern T-CT-F-A-S-C-Te (Septemdrip1e) was found in eleven isolates, sextiple resistant pattern in thirteen; quintiple pattern in eight isolates; quadriple in four isolates; triple in eight isolates; double in four isolates while resistance to single antibiotic (Te and CT) was found in five bacterial isolates. The Minimal Inhibitory Concentrations &(MIC) of 4 antibiotics (ampicillin, ch1oramphenico1, Streptomycin and tetracyc1ine) were deterrained for the bacterial isolates. Two of the Shigella isolates were sensitive to ampicillin, the MIC of ampicillin was 8 ug per ml for them, 1 to chloramphenicol; 4 to Streptomycin while all isolates were resistant to tetracyc1ine. The MIC of I ampicillin for 14 of the Salmonel1a isolates was 8 ug per ml while 11 and 9 isolates of the same organism: were resistant to chloramphenicol and Streptomycin respective1y . The following reistance patterns were observed: A-C-S-T, C-S-T, A-C-T and A-S-T. All the forty-two isolates screened transferred ampicillin resistance (100 percent). Twenty-one isolates (50.0 percent) transfered two determinants, either A-T or A-S or A-C. aeyen v16.6 percent) transfered three determinants either A-T-S or A-S-C. 111 None of the isoiates transfered four determinants (A-T-S-C). Among the Shigel1a isoiates the ch1oramphenico1 determinant was transfered at a low frequency (only 3 i screened) whereas the Salmonella isoiates higher frequency ^6 of the 14 screened). The R plasmids ränge in size between I 1. The chloramphenicol R plasmid has a molecular »,eight of 4.00 Mdal., Streptomycin Mdal . The plasmid profile investigated using agaros w . The Shigella isoiates exhibited a large number of small cryptic plasmids. In contras the SalmoneI1a isoiates exhibited fewer number of plasmids. All the plasmids ränge between 0.8 and The virulence of the Shige 11a isoiates was investigated using Sereny Test and Rabbit ligated ileal loop test. Four of the fourteen Shigella isoiates including £.f1eyp i» S e e ca.es „eath ,f In the treatment of diarrhoea the following steps are usually considered (Mandal, 1979): (i) Prevention of contact with the infecting agent; (ii) replacement of sodium, bicarbonate, potassium, Substrate and water loss (iii) interference with the mechanism of diarrhoea; (iv) prevention of infection through the use of vaccine; and (v) use of antibiotics. (1) Prevention of contact with the infecting aeent-L Bacterial diarrhoea (Shigellosis and Salmonellosis) is known to spread through contact 8 with faeces, food, foul water and by "fingers" (Blaser and Newman, 1982). Thus interruption of the faecal-oral t ranstni ss i on of diarrhoea is accomp1ished through widespread introduction o jA clean water supplies, personal and food hygiene and sanitary waste disposal (Rhode, 1984 ) Q - Inadequate refrigeration of stored foods encourages growth of organisms causing acute food poisoning. Salmonella organisms are spread through the mlaasss pProo«cessing of poultry. Control of this and other factors is part of the complex health regulations of the food chain necessary to interrupt transmission of diarrhoea causing pathogens; Ren 1 acement of sodium. bi carbonat e. .pg.tft8.si.wn substrate and water loss: The development of oral fluid therapy for diarrhoea, which was the outcome of research on Vibrio cho1erae demonstrated the high efficacy of replacement of water and electrolytes with an appropriate, absorbable substrate, thereby off-setting the effects of dehydration and substantia11y reducing the number of deaths. Extensive reviews have documented both scientific basis and the efficacy of oral rehydration therapy (ORT) in acute diarr­ hoea (Rohde, 1984; Candy, 1984). This is being extensively 9 practiced in Bangladesh as well as other third world countries including Nigeria. The principle involved is that of co-transport of sodium equimolar with active transport of sugar (Keusch, 1979). 3. Interf erence with the mechanism of Diarrhoi- A number of antisecretory drugs (aspirin, indomethacin, and ch1orpromazine) working through a variety of mechanisms in the mucosal cells have been shown to diminish or reverse the secretory process and, therefore, effectively reduce loss of fluid and electrolyte (Rhode* 1984). For example Aspirin and Indomethacin have been shown to stimulate Sodium and Chlorine absorption in normal tissue and it may be this activity which is responsible for their effect on cholera toxin (Turnberg, 1978). Chloropromazine prevents intestinal secretion in the mouse by inhibiting adeny1cyc1ase activity (Lonroth et al., 197' 4. Prevention through the use of vaccinesi. For oral vaccines against Shigella, five doses and booster doses were required (Levine et al, 1976). 10 In the case of Salmonella, the Ty21a oral typhoid -accine appears to offer some protection, even in single doses (Wahdan et al., 1982) but there are still no vaccines for the over two thousand or more serotypes of common A >almone11a . Recombinant DNA technologies make production of a wide variety of specific antigens possible Cm open the way for eventual polyvalent vaccines aimed- against a host of organisms. For example Shigella-Salmonella hybrid has been created (Formal et al., 1981) by transfering plasmids responsible for form 1 antigen synthesis in Shigel la to established gal E. t.vphi strain. At present research is still going on in various laboratories in the world to find a suitable vaccine to combat the menace of Salmonella and Shigella infections. use 9t Antibiotics; V Several a uthors have advanced three congent reasons for reconsid the use of anti-microbials in the therapy o gellosis (Weissraan et al., 1973): the disease is usually se1f-1imiting and may be mild (especially that due to £. sonnei)? post-infection carriage is usually less than three to four weeks and with increasing frequency, the organism possesses plasmids 11 coding for transferable drug resistance (Anderson, 1968 and Weissman et al., 1974). In cases in which the invasive organism causes a dys entery-1ike syndrome, the specific drug of choice is based on knowledge of sensitivity patterns of the pathogen when cultured in t'he same envi ronment. In case of enteric fever caused by Salmone11a t.yphi. chloramphenico1 has been the most successful drug. The clinical response to the drug has been fairly uniform throughout the world (Mandal, 1979). A rapid improvement in the patient's general condition followed be defervescence within two to five days has beeh^recognised. However, the wide-scale emergence of R-factor mediated resistance to chl or ampheni co 1 (as well as other antibiotics) in _S_. typhi (Datta, 1965) has introduced a new sense of urgency in the search for suitable antibiotics. Problem of P lasmid mediated tranmissible drug resistance.;. K Many of the antibiotics used in treating human infections are also used as chemotherapeutic and prophylactic agents in animals as well as feed additives at low concentrations to increase their growth rate and reduce economic losses of animals (Walton, 1966a; Ojo and Adetosoye, 1977). 12 J Soon after the introduction of antibiotics into medical practice and as feed additives, antibiotics resistance amongst bacteria emerged as a significant problem. A Studies on the nature of antibiotic resistance in bacteria reveal that several biochemical mechanisms may be responsible. These include: (a) alteration of target site in the cell that eliminate or decrease the binding of the drug; (b) decreased drug accumulation into the cell; and (c) antibiotic inactivation by enzymes, etc. Resistance of type a, which arise by mutational alteration of a cellul. ar comp4onent are very common in laboratory derived resistant strains but clinical isolates of this have also been reported (Benveniste and pävies 1973). .<£> Resistance of types b and c are generally found only in clinical isolates of resistant . bacteria, and are normal 1y associated with extrachromosomal element or plasmid (O'Brien, 1987). The plasmids carry "resistance factors" or R-factors. Transfer is effected by contact resulting in conjugation between drug resistant donor cells and senstive recipient cells. 13 Apart from transmissible drug resistance, plasmids also play an important role in the pathogenicity of Shige11a and Salmonella. Takabashi et al. (1988) demonstrated that large plasmid (150 megadalton) found in £. bo.vd i i was responsible for the epithelial cell Penetration by the organism. There is also a correlation betwei presence of a fifty megadalton plasmid in Salmonel1a dublin and its virulence for mice (■Tarakado et al . , 1983). Central to the studies on Shigella and Salmonel1a is the question of the virulence. Levine £_L (1973) established that the primary virulence determinants of Shigellae is the invasive capacity of the organism as strains which cannot penetrate and multiply within the colonic epithelial cells do not cause disease in humans. It is also know that &. f 1 exner i adhere very well to the colonic mucosa of guinea pig in the presence of adhesin (binding protein) found in the intestinal cells (Izhar et al., 1982). S h i gc11a dvsent er i ae is known to elaborate a toxin with cytotoxic, enterotoxic and neurotoxic properties. This heat labile toxin is enterotoxic when injected into rabbit illeal loops (Cavanagh et al., 1956; Keusch et al., 1972a) and lethal to mice and rabbits (Van Heyningen and Glads tone, 1953). Moreover, it is cytotoxic for 14 #* eukaryotic cells such as HeLa cells (Keusch et al., 1972b), KB (human epidermal carcinoma), normal human liver and monkey kidney (Vicari et al., 1960). Furthermore, purified Shigella toxin inhibits protein synthesis in cell-free translation System (Oienick and Wolfe, 1980). Likewise cell-free extract of Salmonel1a has been found to inhibit protein synthesis and cause cytotoxicity in eukaryotic cells (Koo and Peterson, 1982) PreviQus_H-Qrk gii-Salmonei l.s^aiid Shigella in Nigeria; Salmonel1a spp. have been isolated from various animals in Nigeria: cattle (Collard and Sen, 1956). fowls (Sen and Collard, 1957a) pig (Sen and Co 11 ard, 1957b, ) agama lizard (Collard and Montefiore, 1956), goats (Falade, 1976) and captive animals (Falade and Durojaiye, 1977). Other workers, Oduye and Olayemi (1977) and Britt et al. (1978) have also reported the isolation of Salmonellae ............................................................. from dogs. The isolation of Salmonella serntypes from man was first reported by Collard and Sen, (1957). The picture of Salmone11osis in Nigeria is one of wide diversity of types in both man and animals. Many of the Salmonella types obtained from man had also widespread distribution in other sources, whereas other types were limited to man only. 15 Perhaps at one end of the scale would be £. tvphi which has not been isolated from other sources other than man and at the other end would be £. agama which has been found in several sources. In contrast, the distribution of is less widespread. It has been isol few domestic animals. Collard and Sen strains of Shigella over a five-year period (1956-61). Of these TI. 335 were .£• f 1 exner i . 6.135 £. bo vd i i while £. sonnei was least common. Odugbemi et al. (1982) recorded a than Salmonella (0.935) infections in children undervf^ve years of age in Lagos. The most common specie was found to be £,. f1exner i. Shigella has also been isolated from diarrhoeic piglets and fowls (Ibu et al., 1987). Chcmotherapeiiti.cg_.?n.d Bac t gr j a ) r g sis.Un.ee in N iger U?. Diarrhoea caused by Salmonella and Shigella is very common in Nigeria (Odugbemi et al., 1982). The drugs used in treating this condition include ampicillin, Streptomycin, tetracycline and chloramphenicol (Adetosoye and Rotilu, 1986). The laws Controlling the sales of these drugs are not enforced in Nigeria. As a result 16 antimicrobial agents are easily purchased by individuals without prescription; they are sold in motor parks and market places. Thus the indi scr irninate use of these agents in Veterinary and human medicine has resulted into energence of drug resistance (Ojo, 1973; Osoba, 1979 ; Ogunnlaranwo, 1987). The first case of ch1oramphenico1 reCsisvtant Salmonella in Nigeria was reported by Njoku-Obi and Njoku-Obi (1965). Ojo (1973) isolated twenty-four strains of Salmone11a from animals in Ibadan and tested them for the sensitivity to eleven chemotherapeutic agents. Two of the isolates were found to show multiple resistance to chlora- mphenicol, sulphonami de, st reptomycin, tetracyc1ine, ampicillin and septrin. Ibe et al. (1987) isolated S . f1exner i which weH t ound to be resistant to septrin, ampicillin, penicillin, Streptomycin, neomycin and erythromycin from diarrhoeic piglets. Some of the resistant strains have been found to harbour R-factor. Adetosoye and Rotilu (1986) reported the presence of drug resistance plasmids in twenty-four S. typhimurium which were isolated from calves with diarrhoea and fifteen other Salmone11a spp. as well as 17 twenty-four Shigella isolates which were isolated from diarrhoeric children in Ibadan. From these studies it is apparent that drug resistance 18 OBJECTIVES QF STUDY Diarrhoeal diseases of various causes including bacteria, virus and parasitic agents are common and of great public health importance in Nigeria. O^hey are also of great economic importance to the livestock industry. There is some evidence that a Proportion of this disease is caused by Shige 1la and Salmone11a (Akinkugbe et al., 1968; Alonge and Oyekole, 1982; Odugbemi et al., 1982; Adetosoye and Rotil This study is (i) Isolate Salmone11a and Shigella from diarrhoeic humans and piglets. (ii) Characterise such isolates biochemica 1 ly and serologically. (iii) Determine whether there is transmissib1e drug resistance among the isolates. (iv) Isolate and characterise the plasmids harboured by the isolates. (v) Study the pathogenicity of Shigella isolates using various animal models. 19 CHAPTER TWO LITERATURE REVIEW A The first dysentery bacillus was isolated and identified by Kiyoshi Shiga in Japan in 1898 during a severe bacillary dysentery epidemic. Morpho1ogica 11y ,it was described as short, plump and aniline stainable bacillus. Kruse in 1900 isolated bacteria that resembled those of Shiga from ,d ysentery pati, ents ,i n Wes^t Ph al„i a. Fljexner in the same year reported the isolation of mieroorganism he thought looked like Shiga's bacillus from American soldier in the Philipines. Strong and Mustgrave (1900) confirmed the work of Flexner and produced dysentery with the bacteria in a monkey and in a condemned criminal. Castellani (1904) described an acute case of bacillary dysentery which 1ed to death. He found at autopsy that the mucosa of the colon and rectum were thickened, covered with mucus and studded with a large number of very small superficial roundish ulcers. These reports were followed in rapid succession by a large number of publications from virtually all parts of the world which recorded the isolation of these and similar microogranisms from acute and chronic cases of dysentery 20 (Edward and Ewing, 1972). However, important advances in the knowledge of this disease was not made until the 1940s. This was largely through the work of Boyd (1940) who A described a number of Shige11a paradysenteriae from India; Sachs (1943) isolated non-mannito1-fermenting Shigella from Middle-East; Christensen and Gowen (1944) characterized two strains in North-Africa and Ewing (1946) did similar work on strains isolated in Algeria. - « DescriPtion of Shigella; Shigella is Gram negative, non-motile bacillus belonging to the family Enterobacteriaceae (Cowan and Steel, 1974). It produces acid from a number of carbohydrates except lactose; it is methyl-red positive and Voges-Proskauer negative. It does not grow in Koser's citrate medium, does not hydrolyse urea; deaminate Phenylalanine; blackens kliglers hydrogen sulphide medium.lt grows in Moller's cyanide medium; utilizes malonate; oxidizes gluconate and liquefies gelatine; however does not fort lysine decarboxylase. There are four species of dysentery bacilli. They are designated A,B,C,D (Topley and Wilson, 1983) 21 These are described as follows: (1) Slligella dysenteriae (Group A): The dysentery bacteria making up this group are set apart by their inabi1ity to ferment mannitol. S .d.vsent er iae is inramnolotri cal l.v heterotn made up of ten sharply separated serotyp&es arbitrarily designated by numbers. The serotypes appears to be unrelated antigentically except for unilateral cross reaction between some strains of types 2 and 6, and some sttrati;ns of types 3 and 5. dvsenteriae type 1 was the first of the dysentery bacilli to be described and it was referred to as Sh.ga's bacillus (Shiga, 1898). It has marked toxicity for man and experimental animals due to the formation of toxin. This has an effect upon the nervous System of experimental animals and has as an affinity for the gastro­ intestinal tract (Keusch el al., 197i2a). £. dvsenter i ae type 2 differs in that it produces indole and ferments sorbitol and rhamnose. Other serotypes which are culturally identical with &. d.vsenteriae but immunologi cal ly unrelated are known as the Sachs group of dysentery bacilli and are 22 des ignated £. d.vsent er i ae types 3,4,5,6 to 10 (Sachs, 1943). (ii) Shigella f1exner i (Group B). This is composed of those microorganisms formerly referred to as Shigella par adysent er i ae Flexner, and is now naraed 5.. f 1 exner i serotypes 1-6 (Edward and Ewing, 1972). Members of this Group are related one to another through the possession of common group antigens but each serotype contains a type of main antigen by which it may be identified. Mannitol is usually fermented by members of subgroup B. They may be differentiated frora member of subgroups A and C by means of some biochemical reactions as well as serological analysis (iii) Shigel1a boyd i i (Group C). These are also mannitol fermenting dysentery bacilli closely resembling £. f1exner i in biochemical characteristics but differ in several important aspects and are unrelated serologically. There are fifteen serotypes of Shigella boydi i recognized (Edward and Ewing, 1972). (iv) Shigella sonnei (Group D): These are late lactose fermenting dysentery bacilli. The Sonnei bacillus ferments mannitol and does not produce indole; it is sero1ogica 11y distinctive and homogenous. 23 £. soiinei can occur in two phases, namely; Phase I and II or S and R forms. The serological properties of ant igens of R forms differed from those of S forms and an R or form II antiserum will not react with the S or form I (Edward and Ewing, Shigella infections: The Shigellae were previously thought to be highly host adapted, naturally infecting only humans and certain subprimates like chimpanzeez and monkeys (Keusch, 1979).However, cases of Shigello ave also been reported indogs (Doems and Mortelmans, 1955); swine and calf (Ueda et al., 1963); poultry (Nyaga et al., 1985) and pigs (Ibu et al., 1987). In most instances the epidemiology 01 Shigellosis is traceable to a human host, whether symptomatic or asymptomatic apd the route describe a circle from the anus to the mouth and back to the anus once again (Christie, 1968; Grady and Keush, 1971). In the case of dvsenteriae 1, as few as 10 to 100 bacteria suffice to produce symptomatic disease in 10 to 40 percent of adult volunteers respectively (Levine et al., 1973). As a result of this miniscule inoculum it is rather simple 24 for Shigeallae to spread by contact without interposition of a vehicle such as food, water or drink to amplify the infection doses (Keusch, 1979). A thin veener of infected faeces on the fingers may be all that is required and indeed viable Shigellae can regu cultured from the fingers hours after experi inoculation of bacteria on the skin (Christi ek,? 1968). Transmission is enhanced however, when sanitation is poor or there is opportunity for the organism to reach food or water. Nonetheless, in more developed countries, epidemic shigellosis can be traced to faulI t.y .water supply or sewage (Hardy and Watt, 1948) or contamination of food as varied as milk, cheese and fruits (Christie, 1968). In those countries, Shigellosis is often an endemic contact-spread disease affecting children under the age of ten years Epidemiologically, there has been a noticeable change in species prevalence over the past hundred years. The outbreaks which occured in Japan early in this Century was due to J5_. dysenter i ae 1 (Kostrewski and S typulkowska-Mi siurewicz, 1968). In the periods between WorldWars (1920-1939) this picture gradually changed and 25 sonnei emerged as the most common isolate in Europe and Japan (Reller et al., 1969). Of late 5.. dysenter i ae has once again caused epidemic disease in many part s of the world such as Bangladesh (Rahaman et al., 1975 Clinical manifestation of the disease; Oral infection with Shige11a generally results in the onset of fever and watery diarrhoea within twenty-four and seventy-two hours (Dupont et al., 1969). In many instances this is followed by dysie ntery syndrome, including abdominal cramps, tenesmus and bloody mucoid stools (Dupont et al., 1969; Mata et al, .1, 1970). Whenever diarrhoea is detected in experimental Shigellosis; the jejunum is in a secretory state (Keusch, 1979); whenever there is dysentery, the colon is markedly inflammed and many invading bacteria are present (Takeuchi et al., 1968). Thus shigellosis appear to be a two-organ disease - a proximal bowel secretory diarrhoea and an acute bacterial colitis resulting in dysentery (Keusch, 1978). 26 Pathogenesis; Enteric pathogens are known to cause disease by one or two distinct mechanisms: elaborat ion of enterotoxin or epithelial penetration (Sprinz, 1969). A Enterotoxin of Shigella d.vsenteriae was first described in 1903 and called Shiga neurotoxin (Keusch and Jacemicz, 1975). Parenteral injection of bacterial lysate or cell-free media supernatant into susceptible animal^caused characteristic 1imb paralysis which led to the • Classification of Shigella toxin as neurotoxin (Olitsky and Kligler, 1920). Thiee Ssym[p toms prioduced by neurotoxin were unlike the disease induWced b y intact b*acteria in man (described above). Thus the concept that neutrotoxin participated in the pathogenesis of Shigella feil into disfavour. It was discovered later that £. dysenter iae produced a protein toxin capable of causing intestinal fluid secretion (Keusch et al., 1972). This discovery opened the question of the role of toxins in the pathogenesis of Shigella diarrhoea. Eiklid and Olsnes (1983) compared the biological activities of the enterotoxin of d.vsenter i ae with that of a well studied 20-year-old partially purified 27 preparation of neurotoxin from same organism. . They found Tr ;r». were: i) intestinal fluid accumulation ii) limb paralysis in mice and iii) cell death in both preparations When the toxin was further subjected to Sephadex ge 1 filteration, chromatogprahy, isoelectric focusing and poly acrilamide gel e1 ectrophoresis, two fractions which were cytotoxic to heLa cells were obtained. One of the fractions was also associated with enterotoxigenicity and neurotoxicity. These data suggest that Shigella enterotoxin and neurotoxin are closely related proteins and may indeed by indentical (Koo and Peterson, 1982, Eiklid t and Olsnes, 1983). Other properties of Shigella toxin include its heat-1iabi1ity, destruction by proteolytic enzymes; isoelectric pH 7.2 and molecular weight of 72,000 daltons (Keusch and Jacewizs, 1975; Mclver et at., 1975) Two other species of Shigella (flexneri and sonnei) have been shown to produce indentical enterotoxin (Keusch and Jacewicz 1977a). 28 Role of Shigella toxini Opinions seem divided on the actual role played by Shigella toxins in the pathogenesis of diarrhoea. The toxin is lethal to mice and rabbits (Van Heyningen and Gladstone, 1953). Moreover it is cytotoxic for eukaryotic cells, such as HeLa cells (Keusch et al., 1972b) KB (human epidermoid carcinoma), normal human liver and monkey (Vicari et al., 1966). Fürthermore, purified Shigella toxin inhibit protein synethesis in intact HeLa cells (Brown et al., 1980) as well as in cell free translation System ,( Thompson eOt ayl., 1976; Oienick and Wolfe, 1980). It has been shown that the most provocative biologic activity of the toxin is its ability to cause transudation of fluid in rabbit illeum (Keusch et al., 1972a). Since this model has proved so us.eful for definition of pathogenicity of diarrhoea producing strains of V. cho1 erae and £. co1i (De and Chatterjee, 1953; Moon et al., 1970), it was logical to suggest that Shiga toxin is an enterotoxin capable of causing human diarrhoea in a manner analogous to cholera and Jjj. co1i toxins. However this view was contrary to the results of studies in animals and volunteers. Levin et al. (1973) demonstrated 29 that large number of non-invasive but enterotoxigenic Shige11a strains were well tolerated by human models when fed orally. In contrast, the same workers showed that an invasive but non-toxigenic strain caused Shigellosis in monkeys and human volunteers. Also Flores et al. (1974) and Steinberg et al. (1975) demonstrated that Shigella enterotoxin applied in vivo and vitro into intestinal preparations did not produce any marked increase in adenylate cyclase or cyclic AMP as noted after the application of Y« cho1 erae entesrrotoxin. The Consensus of opinion was that the ability of Shigella organism to penerate the intestine was the primary determinant of virulence. A Bacterial invasio Many investigators have argued in favour of bacterial invasion of small intestinal wall as an essential process in the pathogenesis of Shigel la diarthoea (Formal £_L al.. 1972; Levine et al., 1973). It is known that piliated strains of Shigel1a flexneri adhere to human intesitinal epithelial cells better than non-piliated strains (Duguid and Gillies, 1957). Also the presence of a mucosal adhesin has been implicated in the adherence of £. flexneri to guinea pig intestinal cells (Nuchamowitz and 30 Mirelman, 1982). In experimental Shigella and Salmonella infection, electron microscop^ has shown that the brush border was destroyed and the bacteria were engulfed, by an invagination of the cell membrane of the host cells. A Fron the vacuoles in the epithelial cells the organisms invade and destroy adjacent cells producing ulceration and local inf1ammation (Takeuchi et al., 1965 and Takeuchi, 1967). Evidence reviewed by Formal and Hornick (1978) suggested that invasion, at least in Shigella, is determined by multiple chromosonal genes. A major problem in the stOudyy of invasive organisms is the lack of a practical assay System. In the Standard in vitro test (Sereny) organisms are instilled into the conjunctival sac of guinea pigs. Invasion of the corneal epithelial cells produce keratoconjunctivits which correlates with intestinal invasion (LaBrec £.t al ., 1964). Invasion of HeLa monolayer has been used as a more practical assay, but organism adhering to the cells make Interpretation of results difficult and the assay has fallen into disuse (Keusch, 1979). Human volunteer experiments and challenge of laboratory animals are alternative techniques but of limited value in screening large number of isolates. 31 Patholog.v of Shigella infections: Bacillary dysentery is an infection localized in the alimentary tract (Burrows et al., 1968). Histological examination of infected guinea pig illeum revealed the following changes: markedly altered villi, severe acute inflamation of the mucosa with haemorrhage, discharge of goblet cells and denudation of surface epithelium (Keusch et al., 1972a; Steinberg et al., 1972; Levine et at., 1973). Protoscopic examination of the rectal mucosa demonstrates significant colitis manifested by inflammed oedematous mucosa with patechial haemorrhages and mucus (Levine et al., 1973; Mathan et al., 1986). Rectal biospy revealed po1ymorphonuc1ear infi1teration, goblet cell depletion, microulcers, haemorrhage and oedema (Levine et al., 1973; Annond et al., 1986). Treatment thera.P.y in Shigellosis; In the early 1940s the Sulfonamide were used for the treatment of bacillary dysentery. However, as early as the mid 1940s several countries began to note that a large Proportion of isolates of Shigellae were resistant to Sulfonamides (Cheever, 1952). As a result of the eaergence of drug resistance the sulphonamides became ineffective in the treatment of bacillary dysentery in Japan by 1959 32 (Watanabe and Fukasawa, 1960; Anderson, 1965; Datta, 1965; Weissman et al., 1973). A study of almost 1,500 cases in Korea in 1953 showed that almost all strains of Shigella were resistant to Sulfonamide thus indicating that the emergence of drug resistance is world wide (Garfinkei et al., 1953). Other antibiotics including the tetracyclines and ampicillins were introduced for the treatment of bacillary dysentary (Maltalin et al., 1967). Ampicillin therapy resulted in bacterio1ogica 1 clearance of stool in over 90 percent of patients within ours. Multiple drug resistance to ampicillin was recognised in the early 50s in Japan and in vitro transfer of R-factors fromj^. coli to Shigella was demonstrated (Watanabe, 1963; and Farrar and Eidson, 1971). r V As result of this development, the hitherto reliable ampicillin feil out of choice for Shigellosis in many areas of the world. When isolates were increasingly resistant to ampicillin, triraethoprim-sulphamethoxazo1e was prescribed (Keusch, 1979). Nalidixic acid is also effective in vitro and in general in vivo but less so than the above drugs (Keusch, 1979). Again reistance to nalidixic acid has been reported (Panhotra et al., 1985). 33 Generally, antimicrobia1 therapy follows recognized guideliness for all infectious diseases: the orgnni sm should be sensitive in vitro, the infection should be responsive in vivo and the risk of side effects should be minimal compared to the expected benefits and certainly no greater risk if the disease was not treated (Keusch, 1979). An additional criterion is that the drug must be absorbable in order to reach the population of organism within the lamina propria of the gut (Haltalin et al., 1967). The ■ guidelines ruled out the use of oral neomycin or furazolidone (non-absorbable) (Haltalin and Nelson, 1972), chloramphenicol (potentially too toxic), suphadiazine or or other sulpha drugs (resistant in vivo) (Haltalin et al., 1976). A Flmid-and eleclroüytg.;. Rahaman et al**(l975)observed that Shigella diarrhoea is not usually accompanied by massive loss of fluid leading to severe dehydration, but, however, there is significant fluid losses, requiring attention to the state of dehydration. Mild to moderate dehydration should be easily managed with oral rehydration Solutions, consisting of electrolytes and an actively transported sugar such as 34 giucose (Keusch, 1979). The principle involved is that of co-transport of sodium equimolar with active transport of sugar (Field, 1977). Controversy still reigns regarding the specific nature and concentration of salts and sugar to be chosen. Keusch ( 1 979) based on considerable exppeerniie nce in the field recommended a single ad libitum oral rehydration solution (in mmol/1: Na 81 * CI-71, HCO 28, 3 Glucose 139) for treatment of all dehydrating infectious diarrhoea, regardless of stool sodium concentration, so long as physiological regulatory mechanism (thirst, renal response) remain intact, unless giucose intolerance is present. The electrolyte composition suggested for oral rehydration can be achieved in the household by mixing hald a teaspoonful of table salt, half a teaspoonful of bicarbonate of soda, a quarter of teaspoon of po’assium Chloride and four teaspoonful of table sugar (Glucose) in a a litre of water (WHO Diarrhoeal Disease Control (CDD) Programme, 1980). For some time, the WHO Programme for the control of diarrhoeal disease (CDD) has been researching into a more stable oral rehydration salts (ORS) formula. Laboratory tests have shown that this was achievable by replacing the sodium bicabonate in the formular with trisodium citrate hydrate 35 (WHO Diarrhoeal Disease Control (CDD) Programme, 1984). SALMQNEILAE The Salmonel1a group was originally created by medical bacterialogists to include organisms that gave rise to a certain type of illness in man and animals and were related antigentica 1 ly. It is now customary to lay emphasis on biochemical activity (Topley and Wilson, 1983). Generally' they are motile, produce acid and gas from glucose and mannitol, and usually from sorbitol. They rarely ferment sucrose or adonitol, and rarely form indole. Acety-methy1 carbin ol is not formed, do not hydrolyse urea or deaminate pheny1a1 anine, produce H S actively and grows 2 in citrate medium and form lysine decarboxyläse. The many serotypes in the group are closely related to each other by somatic and flagella antigens and most strains show diphasic Variation on flagella antigens. They are pathogenic for man and many species of animals giving rise to enteritis and typhoid-like disease (Edward and Ewing, 1972). 36 Salmonellae are divided into four subgenera. The first of these includes the typhoid and parathyphoid bacilli and other animal types while the remaining three sub: A genera coraprise of organisms that are in the main parasites of cold blooded animals. (Topley and Wilson, 1983). Sub-genera I: Most ferments dulcitol but not Lactose or salicin, KCN sensitive and do not 1iquef y gela t in, Sub-genera II: Also ferment dulcitol but liquefy gelat in. Sub-genera III:(Arizona gfp)4:. Acidi fy lactose but not dulcitol and liquefy gelatin. Sub-general IV:Members acidify salicin but not lactose or dulcitol. Liquefy gelatin and resistant to KCN. Salmonel.l.a. .I.nfections;: < j y The epidemiology of Salmonellae other than those causing typhoid and paratyphoid fever with respect to infection in man mostly involves the animal reservoir and transmission through food in which mu1tip1ication may take place (Edel et al., 1981). Large scale or intensified farming practices confine animals ori fowls in close quarters. Frequently the animals have to live in contact 37 with their own excreta, which also may contaminate their feed or drinkin? arrangement. Salmonellae, inadvertenly introduced into a herd of flock through contaminated feed, water, pasture, sub-c1 inica 11y infected new stock or sometimes by rodents, wild birds or even man himself rapidly spread by cross infection (Edel et al., 1981). The excrement through effluents and through being used as fertilizer carries the contaminant to the environment and surface waters while at the abattoir their infecting .SalJDQUe11a can be transfered t destined for human comsumption (Richardson, 1975; Turnbull, 1979). Typhoid and paratypoid fever occur throughout the world (Bockemuehl, 1976). Endemie disease is prevalent in many countries of the Far East, Middle East, Central and South America and Africa. This is largely a reflection of the Standard of water supply and sanitation. ln the rest of Europe and North America the incidence of enteric fever has declined steadily-in the last half Century, and the disease has largely become an imported one (Mandal, 1979). Transmission: £.. typhi and £. paratvphi are strict human pathogens and the ultimate source is almost invariably man (Burrows et al., 1968). Tramsmission is through direct or 38 indirect contact with faeces or urine of a patient or a carrier (Bennet, Jr. and Hook, 1959; Yoshikawa et al.f 1980). The principal vehicle of spread are conittaaim ni nat te el1d drii:n ks play an important role in maintaining the endemicity of infection (Cvj etanovic, 1976; Onile and Odugbemi, 1987). Incidence of contamination of "fast food" has also been documented in Nigeria (Alonge and Oyekole, 1982). The classical Symptoms of Salmes *1 1 1 a infection has been described (see Introduct ion) . Ho.wever, Symptoms are also related to the severity of infect n, the sites of action of > X ? Salmonellosis has been associated are malignances, liver disease, malaria, bar tone 11osis, Schistosomiasis and haemog1obinopathies (Bennet, Jr. and Hook, 1959). The incidence of complication of Salmonella infection include arthritis and bacteremia (Torrey et al., 1985); Osteomyelitis (Wu et al, 1985); pneumonia (Canney, 1985); and endophthalamitis in infants (Appel, 1986). Other comp 1ications of enteric fever are intestinal haemorrhage and Perforation (Mandal, 1979). Enterotoxin Production by Salmonella; Despite the progress made in the study of enteric infections, the mechanism by which Salmonella causes 40 Gastroenteritis still remains an enigma to many investigators. Koupal and Deible (1975) demonstrated the presence of enterotoxin in culture filterates o t A S. enteritidis. In subseauent vears the entero to3xin ? was demonstrated in other species of Sa lmone 1 1 (Sandefur and Peterson, 1976; Thapliyal and Singh, 1978). Salmonella toxin has been shown to cause cell detachment and inhibited protein synthesis in intact Vero cells (Koo and Peterson, 1982). Maximum toxin was produced at pH 7.3 after 18h aerated incubation at 37 C in £. enteritidis (Sobeh and Vadel >ra, , 983), and evoked fluid secretion in the rabbit illeum (Giannella et al., 1973). Pathology of Salmonella infections; Rectal biopsies of patients with Salmonella infections showed abnorma1ities ranging from mucosal oedema and hyperaemia with or without petechial haemorranges to mucosal friability with slough formation and spontaneous haemorrhages (Day et al., 1978). There was dilation and congestion of capillaries in the mucosa and submucosa and focal collections of polymorphonuclear leucocytes were present in the lamina propria and in the lumen of mucosal capillaries. 41 In most of the biopsies, crypt abscesses and variable destruction of the crypts associated with mucus deple- tion were seen (Mandat, 1979). Jj-SAtment pf SftlrwnelIpqis ; A For the past thirty years ch1oramphenico1 has been the most successful drug in the treatment of enteric fever. The recommended dose in adult is 500mg every four hours tili defervescence, then 500 mg six-hourly, the total lasting for two weeks (Mandat, 1979). The drug is generally given orally but in the initial stage, when the patient is frequently anorexic and perhaps having diarhoea, the drug should be given intravenously (Synder et al. , 1976). However, ch1oramphenico1 is not the ideal drug because of the risk of marrow toxicity and the high relapse rate (Kamat, 1970)C. Av reover, recent wide-scale emergenceof £. typhi strains with R factor-mediated resistänce to Ch1oramphenico1 has brought about a new sense of urgency in the search for a suitable alternative (Mandal, 1979). Such alternatives are: (i) Ampi ci11 in: Düring the sixties, several studies (Robertson et al., 1968; Herzog, 1976) showed the drug to be distinctly inferior to ch1orampheni co1. 42 The response was slow and the failure rate was as high as 30 percent. This drug is populär in Nigeria and has been known to induce resistance (Adetosoye and Rotilu, 1986). (ii) Amox.vci 11 in; This drug was introduced into Nigeria in 1973 and its use has given more promising results. When amoxycillin was used Pillay et al., (1975) found that fever in these patients lasted 6.8 days whii1e it lasted V7.3 day s inch1oramphenico1 group in a randomized comparative trial. Four of the ch1oramphenico1 group relapsed but none on t(»e amoxycillin group. (iii) Co-trimoxazolet This drug has emerged as the most successful challenger to chloramphenico1 as the drug of choice in enteric fever. After the original report by Akinkugbe et al.f (1968) of more rapid defervescence with co-trimoxazo1e than with chloramphenico1, the drug has been used successfully in the treatment of typhoid fever in well over thousands of cases. It was later found that "toxic crisis" which may sometimes complicate ch1oramphenico1 treatment did not occur with co-trimoxazole (Kamat, 1970). 43 (iv) Furazolidone: This nitrofurantoin derivative has been used mainly in the Indian subcontinent (Mandat, 1979). It has the advantage Of being cheap but appears to be somewhat less effective than chloramphenicol in man (Herzog, 1976). It has however been used to control experimental Salmonella gallingfium infect n chicken (Ojo and Adetosoye, 1977). . 44 Isolation and characterizat ion of Shitrellae and Salmonellae A nuraber of suitabie cultural techniques have been developed over the years for isolation of Salmonel1a and Shigella. For instance there is a wide acceptance of the value of elevated temperature enrichment for isolating Salmonella (Georgala and Boothroyd, 1964; Spino, 1966). Banfer (1971) found 43 C to be Optimum incubation temperature and selenite F broth a suitabie enrichment medium. Livings tUne (1965) found that incubation of Salmonella-Shigella plates (SS agar Difco No. 0074) at 40 C allowed Salmonellas and Shigellas to form colonies but controlled the growth of unwanted organ i sms. It is well known that Salmonella and Shigella are not uniformly distributed through contaminated material and invariably in enrichment cultures and that several subcultures, all made at the same time, may be necessary to demonstrate them (Cowan and Steel, 1974). Harvey and Price (1979) subcultured, after 24 hours incubation, a Selenite broth inoculated with faeces onto eight separate plates of Brillant green and MacConkey agar 45 Only two out of the eight plates were found positive for Salmonella after incubation The importance of subculture timing from fluid media has been increasingly recognized f ound that it was no advantage to use enrichment periods longer than 24 hrs. At 24h incubation 6035 of his samples were positive however , subculturing at 48h and 96h decreased the isolations rate to 23% and 11% respectively. * • The problem of infection with multiple serotypes in man has been recognized (Harvey and Price, 1979). Multiple serotype infection is also of interest to Veter inarry bacterio1ogists (Edward and Brunner, 1946) Although multiple infections are not common in Shigellosis as in Salmonella, a number of techniques have been found to be useful in dealing with this oblem. These include the use of agg1utinating serum. iley and Laidley (1955) used the method for the Separation of single Salmonella serotype from a mixture by use of 0 and H agglutinating sera in plates of semi-solid agar. The usual method of obtaining pure cultures by dilution of a mixed culture may also be applied to material containing multiple 46 serotypes (Cowan and Steel, 1974). If a sample is divided into many subsamp1 es, it is proibbaable that the serotypes isolated from the subsamp]>1 es will not be identical. Identical result can be achieve d by multiple subculture from enrichment media. The earliest reference to an enrichment method was found in the work of Vincent (1890) who used five drops of 5% (w/v) phenol in 10ml of broth. This was inoculated with 5-10 drops of sewage-polluted water and incubated at Ä f The point was made by Thomson (1955) who recorded that ordinary nutrient broth was generally able to act as enrichment medium for the isolation of pathogen in faeces. Selenite F broth did not come into general use until Leifson (1936) developed several fuild media containing different concentration of sodium hydrogen selenite. It was found that 0.8% Sodium Selenite yielded Optimum result for the isolation of Salmonella tvohi. Sodium tetrathionate broth (containing a mixture of sodium thiosuplhate and iodine) is also very populär as an enrichment medium (Edward and Ewing, 1972). Knox et al., (1943) ha<\ expressed the formulae they studied 47 in terms of ml of 0.5 mol/1 iodine and 1 mol/1 thiosulphate to 100ml of medium. Between 1923 and 1957, there was a series of media used with a concentration ränge of sodium tetrathionate varying from 0.015 - 0.039 mol/1. To increase the complexity of the Situation, other workers have further modified tetrathionate media by addition of novobiocii^ and sodium laurylsulphate (Harvey and Price, 1979). ' Over the years, a series of enrichment broths have been described. V This include magnesium Chloride malachite green (Rappaport et al., 1956); Strontium Chloride and Strontium selenite (Chau and Huang, 1971) Bismuth sulphite (Gell et al., 1945); Gram negative (GN) broth (Hajna, 1955) e.t.c. Obviously the choice of enrichment media to be used will be determined by the specialist interest of the bacteriologist. < seelenite F and GN broth were found to be essential for 5 the diagnosis of typhoid fever and shigellosis (Harvey and Price, 1979). For selective plating a number of selective agar are in current use. Among them are Brilliant green agar; bile salt agar. Bismuth sulphate agar, Salmonella - Shigella (SS) agar, MacConkey agar, 48 Hektoen enteric agar, Xylose-lysine deoxycholate agar, and Deoxycholate citrate agar. A comparative study carried out by Goyal et al., (1981) demonstrated the superiority of Xy1 ose-1ysine deoxycho ilate agar aind MacConkey agar in the isolation of Salmone11a and Shigella. Devenish et al. (1980) d«eveloped a new medium called nov‘~iocins, metabolic enzymes, enterotoxins, virulence factors, resistance to heavy metals, to ul traviole'. * radiations and production of haemolysins (Jacoby and Swartz,1980). 64. Methods of Plasmid transfcr: Generally, there are three raethods of genetic transfer of Information in microorganisms, cell to cell contact or conjugation, transformation (naked DNA mediated) and transduct ion (bacteriophagemediated) Watanabe, 1966; Lacey, 1971). Conjugative plasmids can be detected genetically by testing for transfer of the property they deterraine to a suitable recipent by mating (Falkow, 1975). For example, to detect R-Dlasmid transfer to E. coli. an ant ibiotic-sensitive recipient made chromosona1 ly resistant by mutationtb nalidixic acid is mixed in liquid culture with the presumptive donor organism and then plated on media containing nalidixidic acid (which will prevent growth of donor) together /wiAth an antibiotic that prevents growth of recipient except resistance transfer occurs. In this process pair formation takes place between donor and recipient cells by means of a specific structure synthesized by the donor, the sex pilli. This attaches to the surface of the recipient cell and may serve as the conduit through which plasmid DNA passes from donor to recipient 65 (Anderson, 1968). THere are also "aggregates" consis- ting of a number of bacteria joined together by sex pilli. One strand of plasmid DNA passes into the recipient cells and complimentary Strands are ' donor synthesized in both^and recipient cells (Dunny et al., 1978). In transformation a drop of a solution of transforming DNA frora donor strain is mixed with the recipient cells. The treated cells are then spread on antibiotics-containing agar plates for selection (Ogunnariwo, 1987). Transduction proceduresj Qemrploy bacteriophages e.g. phage epsilon in Sa1 mono 11a in carrying out genetic transfer from donor to recipient (Watanabe and Lyang, 1962) and phage PI in £. coli (Harada el at., 1963). / P Conditions governing the freauency of Transfer in -C.Q.nLi.u ve plasroids; The frequency of transfer of drug resistance is the resultant of the interaction of a number of influences (Anderson, 1968; Davies and Smith, 1978): (a) The Recipient Strain: Different members of the Enterobacteriaceae vary in their susceptibi1ity i 66 to infection with a given R factor. In the case of R factors in which the determinants are closely linked with the transfer factor, this is probably largely the result of the varying capacity of different strains for accepting the transfer factor encoded (Watanabe, 1963). £. coli K is 12 known to be an excellent recipient for R-factors of diverse origin. On the other hand &. t-VPhimurium type 36 is a relatively poor recipient for some R-factors originally found on £. co1i and Shigellae but good rXectirpient for R-factors originally defined in .S., t.vphimur i um. (b) The donor strain: Some strains seem to be more efficient donors that others. This character is presumably dependent at least, in phar-t ron the state of the repression of the transfer factor in the strain concerned. e Ph.vsiological state of the donor and recioi ent cel1s: Transfer of R-factors to recipients cultures is usually low in -5 frequency and raay be less than 10 per donor cell after mating for one hour. If the host cells are in suitable physio1ogica 1 state, e.g. log phase, adequate nutrient supply, etc 67 spread of resistance factor is enhanced in recipient culture. This is caused by derepresion of the transfer factor concerned. The initial derepression depends on the physio1ogica 1 state of thle doinor- recipient System. Epidemie spread of the transfer factor does not start until more than twelve hours have elapsed after mixin? do recipient trains (Anderson, 1968). then results in rapid spread between recipient cells, so that fifty percent or more are infected within a few hours. ( d ) The nature of 4the° linkaee between the determinants and the transfer factor? A reversible association of Ampicillin resistance gene and the transfer factor result in a lower rate of transfer of the complete R factor than close linkage of the tetracycline resistance genes and transfer factor type, in which the rate of transfer of the determinant is that of the transfer factor itself. V 68 (e) Ntm-SPecilic factors; For example, the density of cultures determines the frequency of contact and therefore the possibility of con jugat ion tietween donor and recipient cells and recipient celf" *hat have already acquired R-factors. Sorae plasn transfer rauch more efficiently on solid than in liquid medium so the mating impringed on a filter for mo conjugat ion (Jacoby and Swartz, 1980). For a few . plasmidsjtransfer is temperature sensitive and occurs more readily at 22 C than 37 C (Tarawaki et al., 1967). Thus both low and high incubation temperatures should be employed when attempting However, at about (Fa 1kow, 1975). Incompat ibi 1 i t.v behaviour;. Incompatibi 1ity behaviour is often used to classify plasmids genetically. Compatible plasmids can coexist in the same host, while incompatible plasmids cannot and so tend to displace each other (Chun et al., 1984). • Plasmids carrying resistance factors (R-factors) found in Salmonellae and Shigellae have been grouped as follows (Jacoby and Swartz, 1980) s Am = Ampicillin; Hg = Mercury ions; Sm = Streptomcyin; Tc = Tetracycline; Cm = Chloramphenicol; Km = Kanamycin; Su = Sulphonamide. 70 Mechanism ol PIasmid-determined Resistance: Plasmid determined resistance to antibiotics by four biochemical mechanisms (B e n v e n a n d Davies, 1973; Davies and Smith, 1978; Jacoby and Swartz, 1980). These are: •S~ (i) The drug is detoxified or inactivated; (ii) Transport of the antibiotic into the cell is blocked; 2? (iii) The target site is alte red ;so that binding of the drug is reduced or eliminated; or (iv) The antibiotic inhibited step is by-passed. The following are known mechanisms which are involved in the resistance against some of the populär drugs: (a) S t r ep t omvc i n : Streptomycin is attacked by\ two different enzymes viz: 3"-, 0-^* hobphottasef-rkse » adeny1transferase (Jacoby and Swartz, 1980). These enzymes when purified have been shown to be fairly small proteins, with submit Molecular weight:of 17 to 29 x 10D (Davies and Smith, 1978). They are found in the per i p 1asmi c scape between the inner and outer cell membranes. 71 Since these enzymes permit growth in the presence of unmodified drug they are thought to provide resistance by modifying aminoglycoside at a faster rate than it can be transported into the cell (Dickie et al., 1978). Once modified the aminoglycoside is no 1 onger protein synthesis. (b) Ampi ci11 in: A major Proportion of the resistance to B-lactam antibiotic such as ampicillin, carbenici11 in and Cephalosporins among strains of gram negative bacilli is produced by a variety of extrachromosomal (plasmid or transposom mediated) B-lactamases, the effect of which is augmented in some strains by impaired diffusion of the antibiotic into the bacterial cell (O'Brien, 1987; Ogunnariwo, 1987). The enzymes are produced inducibly or cons t i t ixt i ve ly and are cell-bound rather than excreted into the surrounding medium (Benveniste and Davies, 1973). More than twenty of these B-lactamases have been identified, but a few predominates, and one of these, the TEM-l-B- lactamase, is encountered more often than are all of others combined (Medeiros, 1984). 72 The B-lactamases are known to hyrolyse the B-lactam ring present in amplicillin and other related antibiotics (Ogunnariwo, ,0ß7' 'rK° enzymes vary in molecular weight from 12 t x 10 and, so far as they have been examin iromuno1ogical1y distinct, except for TEM-2 which cross react and appea very few, perhaps, one araino acid (Ambier and Scott, 1978). The level of resistance encountercd is complicated by such factors as the Substrate affinity of the B-lactamase being produced, the extent of induction (if the enzyme is inducible), the location of the enzyme in the cell and the ease of entry of the antibiotic into the organism (Benvesnite and Davies, 1973). (c) Ch1orampheni co1: Since the introduction of ch1oramphenico1, the emergence of bacteria resistance to this antibiotic has been well documented. Okamoto and Suzuki (1965) were the first to show . the inactivatioo chloramphenicol in the presence of acetyl coenzyme A. The inactivation of chloramphenico1 was due to acetylation of the 73 y i eld 3-ace t: and Davies, ] o n nhc er; 1[ > J L ~CL— ~CL'---■CLH^ ( 1 I OH M- (OH ^ 7 ^7 & The structure of chlorampheni The arrows point to the hydroxyl groups that are acetylated (Adapted from Benveniste and Davies, 1973). The enzyme is synthesized constitutiv6ly and is located intrace11 ularly. 1t has a molecular weight of 80,000 and consists of four identical catalytically inactive subunits each having a molecular weight of 20,000 (Benveniste and Davies, 1973; Jacoby and Swartz, 1980). Only sporadic isolates of Salmone 11a t.vphi were resistant to ch1oramphenico1, which was agent of choice for treatment of typhoid since 1972, when there was a major outbreak of chloramphenicol resistant Salmone11a typhi in Mexico (Anderson and Smith, 1972). Sub- sequent ly, strains of £. t.vphi sitnilarly carrying a _ -0X- 74 ch1oramphenico1 resistance gene on a Inc HI plasmid and similarly resistant to Streptomycin, Sulfonamide and tetracycline have caused an outbreak in India and have become endemic in Vietnam and Thailand (O'Brien jlL al.. 1987). The chloramphenicol-resistance gene was also found on the InC F lme plasmids carried by the widely epidemic non-typhoid serotypes of S a1 mono 1la (Jacoby and Swartz, 1980). (d) Tetracvclines: Resistance to tetracycline is common in R enteric strains (Chopra and Howe, 1978). The fact that the gene mediating tetracycline resistance seems closely linked to that portion of the 11 factor which determines transmissibi 1ity may be the reason for its prevalence. & tracycline is the only antiobitics for which the major mechanism of plasmid determined resistance is a block in drug uptake (Chopra and Ball, 1982). Sensitive bacteria accumulate tetracycline by two independent transport Systems one active and one passive (McMurry and Levy. 1978). Both Systems are partially inhibited in resistant cells. Unlike 75 most plasmid determined resistance mechanism in gram negative bacteria, tetracycline resistance is inducible ^sh^-?aand Howe, 1978). With induction, several new proteins are made and associate with the cell memberane, where they presumably i T interfere with antibiotics uptake. Infact, resistant cells possess an uptake, and perhaps and efflux System for tetracycline that is lacking in sensitive cells (McMurry and Levy, 1978). Tetracycline resistance genes are widely distributed among isolates of Ent erobacteriaceae in all parts of the world (Chopra and Howe, 1978). The levels of drug_resistance con£er.e.d_-by R-factors-L The level of resistance attained by a strain carrying R factor depends on two constituents (Anderson, 1968); the host cell and the resistance determinant. Watanabe and Fukwassa (1960) pointed out that the same R factor may promote different levels of resistance in different hosts. A streotomycin R factor conferred resistance to more than 100 ug/ml of the drug on a Shigella strain, and to only 10 ug/ml on a strain of E ♦co1i. 76 Watson (1967) transfered R factors for multiple resistance, including that to Streptomycin, from Shigellae to £. coli K-12. The recipient cultures showed lower Streptomycin resistance than the donors. The differentft-in strep* ' ’ * " * re however, of a smaller by Watanabe and Fukasawa (1967) demonstrated that mu1ti-resistance R factors endowed the £. co1i recipient with higher chlora- amphenicol resistant than that of shigellae donors. The minial inhibitoryO'fchibitory concetration of ampicillin and pencillin for £. typhiraur ium of page type la resistance to A, S, Su and T described by Anderson and varied between 64 and 128 ug/ml but was the ̂ same for both drugs in each wild strains K-12 infected with R factor from one of the strains of which the MIC was 128 ug/ml, developed an ampicillin MIC of 64 ug/ml, and a pencillin MIC of 91 ug/ml, the difference being reproduceable. These observations confirm that the level of resistance confered by an R factor depends on both the R factor and the host cell. While extreme variations 77 from one hots to another exists, it is also cominon to find, in effect, the same level of resistance in thAe original host and in a new host. & 78 Mon-plasmid-mediated resistance in enteric bacteria Although most mu1tiple-drug resistance in enteric bacteria is plasrnid linked, important types of resistance can be determined by genes located on the bacterial chromosome (Farrar, 1979). Non-transferab,l e, apparently chromosome mediat0ed- 5 cephalospor ing beta-1actamases are found in many Strains of Escherichia coli. indole-positive Eroteus species; Enter Qba.c.t.e.L, Citrobacter» Serratia marcescens and Pseudomonas aerug inosa (Richmond and Sykes, 1973; Medeiros et al., 1984 Farrar and Newsome, 1976). Virtually all strains of Serratia marcescens possess the chromosomal cepha1osporinase, and many also elaborate the p 1asmid-mediated TEM beta-lactamase (Farrar and O'Dell, 1976). In £. aeruginosa. while much resistance is due to plasmid-contro11ed arainog1ycoside - modifying enzyraes, many gentamicin-resistance strains have been isolated from clinical infections which exhibit diminished accumulation of gentamycin but no detectable enzymatic modification of the antibiotic and no plasmids (Bryan et al., 1974; Bryan et al-, 1976). Strains resistant by the enzymatic mechanism are usually 79 highly res i tant^MIO 100 ug/ml) whereas those with diminished pearmeabi1ity are less resistant to gentamcyin (MIC 6-12 ug/ml) (Farrar, 1979) PIasmid-mediated resistance and that due to chromosomal genes may not be entirely unrel (Farrar, 1979). Transposable elements from plasmids can insert into the bacterial chromosome and can decrease or increase the level of functional activity of genes at or near the site of insertion (Saedler et al., 1974). For example, insertion _ nspo ,son into the chromosome might de-repress the synthesis of a drug- inactivating enzyme controlled by chromosomal genes, leading to an increase in resistance (Farrar, 1979). The prevalence of plasmids in medically important bacteria has undoubtedly increased since the beginning of the antibiotic era, and it appears that many of these possess transposable DNA sequences. Lost of R Factor: The foregoing observations suggest four methods whereby an R factor may loose it transferabi1ity (Anderson, 1968): (a) Segregation of the R factor during transfer so that only resistance determinants enter the recipi ent. 80 (b) Segregation during division of the host strain so that some of the progeny receive deterrainants only. (c) Transduction to a fresh host, in which the deter- minant only is carried over by the transducing phage. ........................ f (d) Destruction of the transfer factor by mutagens, without damage to the determinants also known as curing. Among the latter are many com£pounds that appear to function through their interaction with DNA and others that have different sites of action (Jacoby and Swartz, 1980). Known curing agents include ethidium bromide, acriflavine, acridine orange, chloroquine, guinone, daunomycin and methylene blue (Hahn and Clak, 1976). * ‘ ' TransposQ.n.i t is known that many drug resistance genes resides upon DNA sequence which can be translocated from one plasmid to another (Cohen, 1976; and Kopecho, 1967). Such transposons have been described which specify resistance to ampicillin (Hedges and Jacoby, 1974), tetracycline (Klechnar et al., 1975) and ch1oramphenico1 (Gottesman and 81 Rosner, 1975). Six of the wel1-established plasmid- determined beta-lactaraases in gram negative bacteria and four of the novel beta-1actamases are determined by transposons (Jacoby and Swartz, 1980). These ■ include the transposons coding for three TEM-like beta-lactaraases in Pseudomonas spp. TEM-1 is determined by Tn 3 and TEM-2 by Tn 1 which shares considerable homology with Tn 3 (Ogunnariwo, 1987). Plasmids and Virulence in Salmonella and Shigella: It has become increasinly evident that plasmids often play an important role in the pathogenic potential of variety of microorganisms. The pathogenic potential of Shigella f1exneri is directly correlated with the ability to invade and multiply within the colonic mucosa (LaBr ec et al., 1964). Genetic analysis has established that virulence in £. f1exner i is associated with several chromosomal loci (Formal et al 1971; Gemski et al., 1972). Sansonetti (1982) established that all invasive £. f1exner i strains irrespective of serotype, harbour a large plasmid of >140 megadaltons in size. Also spontaneous variants that have lost this 140 megadalton plasmid concomitantly became avirulent i.e. could neither invade HeLa cells or produce 82 kerato-con junct ivi t is in guinea pigs. Sitnilar genes are also known to be haboured by 120 megadalton plasmids (Maurelli et al . , 1985). At least seven polypeptides (designated a through g) have been A identified as unique products of the virulence S- plasmids of Shigella spp and ent ero- invas i ve E_. coli (Oaks et al., 1986). Four of these polypeptides (a, b, c and d) are synethesized fron a 37-kilobase fragment of a cloned plasmid DNA that has the capacity to restore HeLa cell invasiveness in a Shigella recipient which has lost the 140 MDA plasmid (Maurelli et al., 1988) . In enterotoxigenic £. coli the following plasmids have been isolated and analysed; Enterotoxin plasmids (Both St and Lt); colonization antigen plasmids; Vir plasmids (which specificd a surface antigen as well as a heat labile, acid-sensitive, nondialyzable toxin lethal f or rabbit, mice and chickens; and Col V plasmid (Eiwell and Shipley, 1980). Literature concerning the virulence plasmids of Shigella are few. Apart from those concerned with its invasive action (mentioned above) no plasmid has been implicated in the enterotoxin production of Shigella spp (Ellwell and Shipley, 1980). 83 ln the case of Salmonel1a a similar paucity of Information is encountered. Possession of plasmid has not been established with virulence. Butler et al. (1979) transfered £. typhi plasmid to £. tvphimnr i um and the virulence of the R strain for mice wa: assessed by intraperitoneal 50% lethal dose am the number of organis'ms found in the spieen of infected aniraals. The plasmid containing t.vphimur im strain did not prove to be move virulent f ce. Elwell and • Shipley (1980) inferred that the supposition that the epidemic R plasmids per se increased the virulence of their host bacteria lacks convincing supportive evidence. Even in a Situation where the presence of DNA regions specifying virulence enhancing properties has clear that in certain circumstance, R (resistance) plasmid can be considered to be virulence plasmids. The concepts of virulence, that is, the extent or degree of pathogenicity, in terms of human disease is extremely difficult to quantify due to the raany contributing and interacting factors. There is no question, however that the sudden and unexpected of multiple drug resistance in enteric pathogens seriously compromised appropriate 84 dical treatment with the resultant high morbidity (Anderson and Smith, 1972). Immuno.lsmy _o£ Salmonella and h almonel 1 a vaccine: A Animal experiments have shown that it is possible to obtain a high degree of immunity in rabbits guinea pigs against intra-peritoneal inoculation (Burrows et al., 1968). Recovery from experimental enteric infection in the Chimpanzee is also associated with an immunity to subsequent challenge by the oral route, eighteen months after the primary infection (Gaines et al., 1960). The immunity is associated with the development of humoral antibodies such as agglutinins, precipitins and the like. Lysin is also produced, and , like the Vibrio cholerae, the typhoid bacilli undergoes visible dissolution and disintegrat ion in the peritoneal cavity of the immune animal (Burrows et al., 1968> _ The Widal agglutination test has been an invaluable tool in serum diagnosis of typhoid fever (Levine et al., 1978). The test is a macroscopic one and is carried out with both H and O antigens. The interpretation of a single such test must take into consideration 85 « c i 1iiary data such as a previous immunization or ittack of typhoid fever and the prevalence of endemic typhoid in the general population (Burrows et al. 1968). It is therefore difficult to set arbitrary limits; in most instances an 0 titre of 1:100 and an H titre of 1:200 raay be regarded as significant. Typhoid vaccine has been used for many years to produce active prophylactic imraunity (Topley and Wilson, 1983). The vaccine consists of a saline Suspension of typhoid bacilli, usually 1000 million per milliltre, which are k i11ed by heat, pheno1, formaldehye etc. (Burrows et al., 1968). Triple vaccine consisting of para A and B bacilli in addition to typhoid bacilli (TAB) to the same total concentration bu t u a ration of 2*1*1 has been coramonly used (Topley and Wilson, 1983). Ques t < * 7 “ of the assay of the immunogenic potency of typhoid vaccines, and their antigenic composition are raised perenially. There are discrepances between the results of field trials, studies of the experiementa1 diseases, and and immunogenic potency tests, and final answers are as yet possible. Typhoid fever remains a serious public health problem in many regions of 86 the »orld, and the typhoid vaccines which are ««ailable are not wholly satisfactory. Geraanier and Furer (1975) isolated a jilictose epimerase (galE) mutant of Salmone1Ia :>chl (Ty 21a) and the result obtained with animal •odel indicated that this strain has the potential for use as live vaccine. Walulan et al. (1982) carried out a field trial to check the safety and stabiiity of the mutant strain and tested the protection against typhoid fever af f onrded by three oral doses. Earlier studies by Collins and Carter (1972) have shown that live attenua.Otedv vaccine when administered orally, provided mice with better protection against subsequent challenge than to inactivated vacci-n eys .\ The effectiveness of the Ty 21a vaccine was assessed by analysis of the incidence of typhoid fever in the subjects. The result of the follow-up (1 year after) indicated that in the dosage schedule tested, the Ty 21a mutant strain found previously to be stable and safe, was protective against typhoid fever for at least one year, without any side effect like fever, malaise, headache and localized reactions at the site 87 of inoculation. These side effects have served to put the earlier parenteral vaccines out of reckoninj (Burrows et al., 1968). The current commercially available vaccine formu- lation incorporates 10 Q7 Ty 21a strain in gelatine capsule and is given with 0.8g of NaHCO to neutralize gastric acidity (Scientific activities W3HOV-OMS, 1983). Immunit.y to Shigella Infection and Shigella vaccine: The development of an immunity effective to some degree is indicated by the relative resistance of the resident population of an endemic area of the acute disease which affects recent arrival, e.g. "acclimatization diarrhoea" (Burrows et al., 1968; Steffen et al.,1988). This phenomenon is well known to residents of temperate clirnates visiting tropical and subtropical areas. Antibodies, agglutinins, are found in response to infection with dysentery bacilli usually appearing after the sixth day (Topley and Wilson, 1983). The diagnostic significance agglutinins is somewhat uncertain largely because "normal" agglutinins are 88 common. Normal serum commonly agg1utinates Shigella cLvsenteriae 1 in 1:20 dilution, but a titre of 1:40 or higher is suggestive of infection (Burrows et *1., 1968). The antibodies are apparently unrela l g - to effective immunity. Unlike infections with typhoid and related bacilli, bacillary dysentery remains a localized infection, and the bacilli rarely penetrates beyond the regional lymphatics at the most (Topley and Wilson, 1983). AttemptsV to immunize humans orother primates with killed vaccines or even virulent organisms, administered by the parental route have been met with very little success. Several kinds of living vaccines administered by the oral route have been used. One is made from bacilli which is Streptomycin dependent and therefore unable to multiply in the absence of the antibiotic (Formal et al., 1965). Such vaccines of £. flexner i have been field-tested in Yugoslavia and have been found to give significant, but type-specific , protection against the naturally occuring infection (Mel et al., 1965). 89 Polyvalent vaccines of hybrid strains of £» f 1gxngr i lb, 2a, and 3 and £. sonnei 1 given in two doses by oral route have been shown to produce a highly effective immunity against challenge with1A the virulent strains. Formal et al. (1981) transfered plasmid reponsible for form 1 antigen synthesis of £• sonnei conjugatively to established gal E £. t vohi strain. Serological studies revelead that the derivative strain produced the form 1 antigen in addition to the normal £. typhi somatic antigen. Testing in mice demonstrated that the derivative form 1 gal Ŝ. typhi strain is protective against both S . sonnei and J3_. typhi _i'ha 11 enges . It was therefore suggested that gal E _S_. typhi 21a oral vaccine strain, may also serve as a useful carrier for other antigenic determinantvVs Ot9 protect against Shigella infections.1 90 fcHAPTER t h r e e ISOLATION .AND CHARACTERI2ATION QF SHIGELLAE AND SALMONELLAE INVOLVED IN DIARRHOEA 1NTRODUCTION Salmone11a and Shige11a isolation ai chharacterization is a dynamic study and progress in this area continues to be made. Both organisms are found in the intestinal tract of man and other warm- blooded animals as commensals of limited pathogenic Potentials associated with diarrhoeal disease (Topley and Wilson, 1983). Over the years a number of procedures have been developed to aidä ^quuiicck isolatiion and identification from faeces. The importance of pre-enrichment of suspected Materials as a first step in the isolation of these organisms have always been emphasized. A number 'of enrichment broths have also been described (Harvey and Price, 1979). For Salmone11a enrichment the following have been used: Magnesium Chloride, malachite green, Strontium Chloride and Strontium selenite, Gram negative (GN) broth, Selenite F and Sodium tetrathionate broth (Harvey and Price, 1979). The choice of enrichment to be used to determined ' .91 by the specialist interest of the bacterio1ogist. For example Selenite F is known to be essential for the enrichment of jLalmonel 1 a t.vphi primarily and other Salmonellae in faecel sarnples (Leifson, 1936; Harvey and Price, 1964). The same workers also demonstrated that Kauffman tetrathionate broth was more efficient as an enrichment medium for the isolation of Salmone11a from contaminated food and water. * . In the case of Shigella pre-enrichment of suspected material in Seleite F have been found to increase yield by 4.3 and 3.6 percent respectively (Sen, 1964; Bhat et al., 1971). Maximum number of isolations of both Shige 11a and Salmone1Ia organism was also obtained by Rollender et al. (1969) after initial pre-enrichment in GN broth. Various media have been developed for the iso 1ation ^nad Identification of Salmonella and Shigella organisms from faecel sarnples. These include xy 1 os e-1 ys ine-desoxycho 1 a t e agar (XLD), eos ine-me t hy 1 ene blue (EMB) Hektoe'>C .s£n£tbv irrl ^'(1IEA) , desoxycho 1 ate-ci t rat e agar (DCA), Salmonellae-Shigellae agar (SSA) MacConkey 92 agar (MA) , Brilliant green agar (BGA),and Bismuth sulphate agar (BSA) (Goyal et al.t 1981). However roany of the selective and differential plating media are infact so inhibitory as to prevent the growth of A the very organism which they are were intende < «2« - promote (Rollender et al., 1969). SSA and BSA belong to this category (Bhat et al., 1971). Since one medium is not sufficient for the isolation of enteric pathogens from faeces, Goyal et al.(1981) recommended a combination of MA and XLD or MA + HEA based on comparative studies using eight different media. Howev^^both HEA and XLD are known to be very expensive and are rare to comeby in Nigeria. Equally effective for the isolation of Shigella spp is the MacConkey-Tel1urite medium (1 ug/ml potassium tellurite in MacConkey agar) which has been used in the isolcatAio n of both Vibrio cholerae and Shigellaorganisms (Sen, 1964)„. Generally, the differentiation and characterizat ion of the enteric bacilli is based upon antigenic studies. A useful primary differentiation is made on the basis of the lactose fermentation which 93 is roughly correlated with pathogenicity. The coli- form bacteria ferments this sugar rapidly with the formation of acid and gas in twenty four hours while Shigellae and Salmonellae (essentially pathogens) do not ferment it. Similarly the dysentery baci5l2li. or Shigellae divide' into two groups on the basis of fermentations of mannitol and are anaerogenic (Ewing, 1958). The Salmonella group in general . produced gaseous fermentations; typhoid bacillus is typically anaerogenic. A great variety of cultural and biochemical reactions including the conventional sugar fermentations, motility, formation of Indole from tryptophane and various types of specialized tests such as the utilization of tartaric acids and malonate, araino acid decarboxy1ase activity etc. have been useful in the physiological characterization of the Sa lmoiit 1 1 a and Shigel 1 a groups (Edwards and Ewing, 1972). Partial or complete Identification of Shigella and Sa 1mone11a is usually carried out by the use of antisera containing appropriate antibodies. 94 The vast number of different Salmonella serotypes (over 2,000 are known) and the numerous antisera required for the resognition of all these (a total of 58 different "O" antigents and 72 "H"antigens) make Salmonella typing a "specia1ization" requiring a lot of technical skills and know-how. A number of Salmonel1a species can further be subdivided into types on the basis of their susceptibi 1ity to distinct bacterophages (Garg and Singh, 1974). Since the types exhibit a high degree of stability under natural cond itions, phage typing is of immense value in epidemio1ogical investigations in tracing source of typhoid or paratyphoid fever. In the case of Shigel1ae^phage typing is not very populär and serotyping is relatively easy. Based on somatic antigens four species of dysentery bacillus are r ecognized viz: £. d.vsenter i ae . £• f 1 exner i. S. bpydj \ and S .sonnei. These are further divided into various serotypes. In this study the detailed biochemical characteri- zation of the Salmone11 ft and Shigella isolates was carried out in order to differentiate the isolates from other enteric bacteria. 95 Serological characterization was also carried out in order to "pigeon-hole" these isolates into respective 96 MATERIALS AND METHODS Collection of samples and isolation of organisms: A total of 10,000 faecal samples sent to the laboratory from patients with cases of provisiona11y diagnosed diarrhoea in three different hospitals in Ibadan, namely: The University College Hospital (6,000), State Hospitals at Adeoyo (3,000) and Ring Road (1,000) were screened for the presence of Salmonella. and Singe. 1 la. 200 imp>llee:s were also taken from diarrhoec piglets at the Teaching and Research Farm University of Ibadan. The later were collected by using sterile cotton wool swabs. Cultivation techai_gjAe_& A loopful of each stool sample (preferably from blood and muAcoiyd area if any) was inoculated on platesof MacConkey and Deoxycholate citrate agar. Also bijou bottles containing 4ml Selenite F broth were similarly inoculated to enrich the isolation of any Shige11a and Salmonella if present. All cultures were incubated at 37 C for 24 hours. The Selenite F was later subcultured into fresh DCA and one MacConkey agar plates containing 1 ug/ml 97 potassium tellurite (MTA) and incubated at 37 C for another 24 hours. The plates were later read and non-lactose fermenting colonies were sei ect ed. Purification of Isolates; Cultures sharing predorainantly non-l, ac^tose fermentation were subcultured on fre sh DCA to ensure purity. Pure cultures were streaked onto nutrient agar slopes and kept on the shelve and later studied in detai1. Biochemical characterizatio Isolates; The biochemical characterization of the isolates was according to Edward and Ewing (1972) and Cowan and Steel (1979) as follows: (i) Fermentation of Carbohydrate: The isolates were tested in batches to ensure better reproducibi 1ity. They were innoculated into fresh agar plates. A descrete pure colony of each ' S * o late was inoculated into carbohydrate broth containing a Durham tube. The medium consists of nutrient broth plus 0.5^ of the particular carbohydrate e.g. glucose, plus Andraiwindicator. Since the end products of carbohydrate 98 fermentation are acid or acid and gas the indicator revealed production of acid and the inverted vial trapped the gases where produced. The carbohydrates employed for this test were! glucose, lactose, mannitol, xylose . s dulcitol, salicin, rhamnose, sorbi arabinose raffinose, adonitol, maitose and inositol. Test for H.vdrogen sulphide: With the straight wire loop one of the selected colonies was carefully picked and inoculated into a tube each of Kliger Iron Agar ^(KIA) by stabbling the but and streaking the slope. A test tube of peptone water as well as a plnte of MacConkey agar plate were innoculatedi for purify. All the cultures were incubated at 37 C for 24 hours. Hydrogen sulphide was produced by organisms capable of reducing Su1phur-bearing compounds such as Sodium thiosulphate present in the medium. The hydrogen sulphide reacted with iron salts in the medium to form a black precipitate of ferric sulphide. The presence of black colour along the inoculation channcl only was taken as a pos i t i ve resu 11. 99 (i i i) Test_Lax_Indole Production: A twenty four hour broth culture of each of the isolate was used. About 1 ml of Kovacs reagent was delivered into the broth culture. The production of Indole from the metabolism of tryptophan by the bacterial enzyme typtophanase was detected by th S O J development of a pink to red colour. Ä > N (iv) C.vtochrome oxidase test; A piece of Whatman No. 2 filter paper in a Petridish was impregnated with a few drops of freshly prepared oxidase reagent (1.0% tetramethyl parapheny1ene hydroch1oride). A loopful of the growth of the isolate on a agar plate was smeared onto a small area of the reagent-impregnated paper. A positive reaction was denoted by a dark purple colour within 30 seconds. Positive and negative Controls were set up usiinng Pseudomonas aeruginosa and Escheri chi a coli which gave positive and negative eactions respectively for this test. < 5 (v) Urea test: A slope of Christensen’s. urea agar was innoculated heavily with the isolate. It was incubated overnight and examined. The presence of enzyme urease, which hydrolysed urea to ammonia, 100 was detected by a change of colour of phenol red indicator in the medium from straw or yellow (acid) to pink or purple (alkaline). Pale pink colour was disregarded according to the manufactuer's instruct ion. (■ vi)v Citrate utilization test: Koser's citroat~e< broth in a bijou bottle was innoculated with the isolate using a straight wire and later incubated and 30 C. The test.detected those organisms which were capable of utilising citratein the form of its sodium salt as the sole C source. Organism capable of utilising citrate produced alkaline metabolites which changed the pH of the medium, resulting in a change in colour of the bromothymol blue indicator from green (neutral) to deep-blue (a 1 ka1i ne). (vii) Mot i1i tv: Motility was performed by the conventional hanging-drop technique. Each isolate < 5was grown in peptone water and incubated at 37 C overnight. One drop of the broth culture was placed in the centre of a cover-slip. A ring was raade in the centre of a microscopic slide with plasticine. 101 The slide was inverted over the coverslip so that the ring encircled the culture. The slide was quickly turned so that the coverslip was then on top. The organism was examined for mobility using the X10 and X40 objectives. Decarboxylase reaction; Other biochemical tests included lysine decarboxylase, lysine deaminase, ornithine decarbox1ase; Arginine dihydrolase. For the decarboxylase reaction, tubes of the four media (arginine, lysine, ornithine and control) were inoculated through the paraffin layer with the aid of a straight wire. They were incubated and examined daily for four days. Formation of a violet colouration gave a positive decarboxy1ation reacti on. red (MR) reaction: Glucose phosphate (MR) medium was inoculated with each isolate and incubated at 37 C for 2 days. 2 drops of Methyl red solution was added, shaken and examined. Formation of a red/orange colouration proved a positive reaction. 102 Voges Proskauer reaction: After reading the MR reaction the same culture was employed for the VP test. 0.6 ml 5% r oth to give a concentration of 64 ug/ml. This procedure was repeated for the next eight tubes. o oncentrations of the antibiotics in the tubes were 128, 64, 32, 16, 8, 4, 2, 1, 0.5 and 0.25 respectively. One millitre of 8 hours old nutrient broth cultue of each isolate was diluted with 4ml of nutrient broth. 1 ml of this diluted broth culture was innoculated into the tubes containing the serially diluted antibiotics above and incubated at 37 C for 24 hrs. E. co1i 10418 was used as a control. The Minimal Inhibitory Concentration of the antibiotic under test is the lowest concentration of the antibiotic which inhibited the organism. 122 ConjggatiQii--(-interrupted mating) experiments: Plasmid transfer experiment was performed using the Standard procedure. £. oo1i K 12 5 25 resistant ‘X to 200ug/ml nalidixic acid (received frora Dr. A Adetosoye) was used as recipient. The donors were the Shigel1a and Salmone11a isolates which have been found by the disc diffusion method (above) to be resitant to ampicillin, tetracyc1ine, Streptomycin and chloramphenicol either signly or in combinations. The donors and the recipients were grown separately in Brain Heart Infusion broth for four hours. Aliquot of 0.5ml of eah donor cell was mixed with 1ml of recipient cells in sterile Bijou bottles. To this was added 3.5mls of freshly prepared Brain Heart Infusion broth and incubated overnight for 18 hour at 37 C without shaking (Adetosoye and Rotilu, 1988). Selectisn methp.dJ- The selection was carried out using freshly prepared MacConkey agar plates to which has been incorporated various antibiotics formulations (see Table 4.1 below). 123 SELECTIVE MEDIA QF FIVE FQRMULATIONS Anti- AMP TE C S Na < ? - biot i c Med ium 1 25 'V1'00 2 25 00 3 100 4 25 100 5 & 100 Key: Amp: Ampicillin, ö Te: Tetracycline, C: Chloramphenicol S: Streptomycin, Na: Nalidixic acid X 1 Selection nlates: On this medium only £. cg.il transconjugants that has acquired resistance to the drug(s) incorporated into the medium grew. 124 Test for TransconJugants; After inoculating the selection plates with the mixed cultivation broth, the plates were incubated for 24 hours at 37 C. Colonies were picked from the selection medium and tested for antimicrobial susceptibi 1ity by disc diffusion method to establish the transfer of donor resistance determinant. 125 RESULTS Zones of Inhibition produced in a 1awn of organism piated from diluted overnight broth culture were measured (Table 4.2a) (Appendix 5). The resistance patterns of the isolates to the used is shown in Table 4.2b The resistance of the Shigella isolates to each of the four major antibiotics werle of the #ollowing order: Twenty eight of the isolate%«were resistant to Streptomycin, twen twenty one to Ampicillin and The Salmonelli on in number of resistani d u a m , vn a. «g^• IS strains were resistant to Streptomycin, 8 to tetra'cycl ine, 8 to ampicillin and 8 to chloramphenico1. None of the 52 isolates was susceptible to all the antibiotics tested. Overall, twenty one drug resistance patterns were seen in the 52 isolates. However, 10 patterns accounted for 78$ of the total (Table 4.2b). The isolates were resistant to minimum of one and maximum of seven antibiotics. The most common pattern was T-CT-F-A-S-C-Te (20$), followed by T-CT-F-A-S-Te (10$) while four other resistant patterns including CT-S scored 8$ each 126 The seven drug- resistanfcLpattern was more common among &lLLgS-l-l.a iso 1 ates (approx. 33%). Also pattern T-CT-S-Te-C and T-CT-A-S-Te-C both accounting for 16% were not encountered in the Salmonella isolates s - On the other hand patterns CT-F-S and CT-S which occured prominently among Salmone1Ia isolates were not encountered within the Shitrel 1 a i so 1a t es. Table 4.3a, b and c represent the comparative results of in vitro susceptibi 1ity tests on four commonly used antibiotics against the fifty-two isolates of Shige 11a and Salmonella. Ampicillin was found to be most active against Salmonella spp. The antibiotics inhibH ;ed all the isolates but one at a concentration nn tof 64ug/ml. At 8ug/ml more than 40% of the isolates were inhibited (Table 4.3c). Streptmycin and tetracycline showed identical activites. At 32ug/ml almost all the Salmonella isolates were inhibited. The activity of ch1oramphenico1 was slighly inferior to the three others. At concentration of 64ug/ml 3 of the isolates were found to be resistant. At concentrations greater than 128ug/ml one of the Salmonella isolates was not susceptible (Table 4.3a). 127 Overall, none of the antibiotics was found to be inhibitory at concentration lower than lug/ml. The picture encountered in the Shigella isolates was significanly different. There was a consistently high resistancivalue throughout (Fig. 4.3a and b). T he level of ampicillin resistance for Shigella was very high. Twenty-six of the isolates (87 percent) had MIC of >32ug/ral. At 128ug/ml twenty-seven percent of the isolates were uninhibited. The resistance of the Shigel1a isolates to the other antibiotics was found to be high. Twenty-One of the 31 Shigella isolates were not susceptible to 32„ uNg/yml of tetracycline. in vitro activity of Streptomycin and chloramphenicol were similar as there were resistant Shigella organisras encountered at all the concentrationsemployed. For example, none of the isolate was inhibited at 4ug/ml of ei ther ant i biot ic. Table 4.4a shows the resistance patterns of some of the isolates to four commonly used antibiotics and the deterininants transfered on mating each donor with JJ. co1i K12 525, a lactose fermeter resistant to 200ug t of Nalidixic acid used as the recipient. 128 All the forty-two isolates screened transfered ampicillin resistance (100 percent). Twenty-one isolates (50.0 percent) transfered two determinants either A-Te or A-S or A-C. Seven (16.6 percent) transfered three determinants either A-Te-S oi None of the isolates transfered four determinants. Among the Shige 11a species the chloramphenicol determinant was transfered at a low frequency as only three (10 percent) of the isolates were able to transfer the determinant as against six (42.8 percent) recorded in the Salmonel1a isolates. In all the cases where the resistance determinants were successfully transfered, the resultant transconjugants showed resistance to all the antibiotics whose determinants were transfered,„ S 129 DISCUSSION Antimicrobial susceptibi Iity testing provides Information by which therapy can be selected or modified by adjustment of the dosage of the \ antimicrobial agent already being administerd. By the broth dilution method it was detsecytTed in this investigation that tLh e minimal inhisjbiQtoyry concentration (MIC) of Ampicillin to the Salmone11a species were generally fairly high For example most of thera were inhibitqd at concentrations between 4 to 128ug/ml (Table 4.3a and 4.3c). In an earlier work, Rotilu (1985) (Personal communication) found that all the Salmonella isolate ks investigated were inhibited by ampicillin at a cconcentration of less than 30ug/ml. Generally, the level of resistance attained by a strain carrying R factor depends on the host cell and the resistance determinants (Anderson, 1968; Chopra et al., 1978). Thus there is Variation from one bacterium to another. The higher MIC figures observed in this investigation when compared to Rotilu work may be due to the following reasons: (i) increase in seiective ' antibiotic pressure due to indiscriminate use 130 (ii) incorapl ete dosage k V (iii) fake drugs that abound and (iv) increasing seif medication among the populace. The Shigellae investigated in this work were generally more resistant than the Salmtoone l1 l1 ae (Table 4.3a and 4.3b) as significant number of theerma were not inhibited at antimicrobial concentration of 128ug^ml. Previous work in Ibadan by Rotilu (1985) (unpublished) showed that the Shigellae were highly resistant to many antibiotics, including ampicillin, Streptomycin and / v f chloramphenico1. Chun et al. (1984) described a Streptomycin R factor confering resistance of more than l,000ug/ml of the drug on a Shigella strain and to only lOug/ml on a strain of E_. coli. These workers pointed out that the same R factor usually produce different levels of resistance in different isolates. It may be pointed out in passing however that the results of in vitro antimierobia1 tests is usually at variance with the response of humans to antimicrobial therapy. Ilost factors remain the major determinants of the outcome of antimierobia1 therapy (Weinstein and Dal ton, 1968). . 131 Such factors like adherence of bacteria to epithelial surfaces, susceptibi 1ity of bacteria to phagocytosis, Chemotaxis of neutrophills and bactericidal activity of human serum play a significant role on the outcome of antibiotic therapy (Washington, 1979). The fifty-three isolates (31 Shigella and 22 Salmonella) studied share twenty-one resistance patterns to eight antibiotics employed. Previous report by Adetosoye and Rotilu (1986) established nine patterns of resistance to six drugs by Salmonel1a. Shigella and £. co1i isolates Ethiopia, 1 Gebre-Yohannes and Habte-Gabr (1984) found nineteen drug resistance patterns in three hundred and sixty Shigella isolates. The multiple drug resistance Problem occurs worldwide and is asq^result of indiscriminate use of antibiotics. The subtherapeutic use of the antibiotics created indiscriminate selective pressure so that pathogens become resistant to a particular antibiotic or a related one and could transfer such resistance to other bacteria. In the opinion of many workers (Simmons and Stolley, 1974; O'Brien et al., 1987) many of such drugs need no longer be used. 132 Among the Shigella spp., &. f1exner i has been associated with unusually high drug resistance. Gebre- Yohannes and Habte-Gabr (1984) had twelve resistant types on investigating one hundred and eighty-two £. flexneri isolates. ..................... ^ The practical use of multiple drug resistance survey is to guide treatment in areas or farms where laboratory facilities are unavailable (Noworyta, 1972), In such areas, information on drug resistance patterns, preferably linked to specific geographical areas, could be helpful in selecting appropriate drug therapy. Antibiotic resistance usual ly is unpredi because patterns change abruptly. However, in Po 1 and^Noworyta (1972) was able to delineate the "Western resistant" part o f ? oland from the "Eastern sensitive" part. It is doubtful if such a corollary can be made in this country because of constant intermingling of the populace and lack of large-scale systematic studies. However continuous survei1lance of drug resistance in enteric pathogens (e.g. Shigella. Salmonella and £. coli) should be encourage in order to guide doctors in I the choice of drugs. It should be emphasized, however, that antimicrobial therapy has not been a solution to the control of Salmonellosis and Shigellosis. Thls is aainly due to the problea'of infections drug resistance. 133 — *. . r ' ince It has been shown that members of the fam i l1 y Enterobacteriaceae including Salmone11a and harboured R-factors which are transferable to sensitive recipients (Anderson, 1968; Adetosoye and Rotilu, 1986; Olukoya et al., 1988b). The autotransferabi1ity of R plastnids in this study was very high as all the isolates transferred single or multiple resistance deterrainants to £. co1i K12 recipient. Many reports have indicated such high percentage of resistance transfer. Chun et al. (1984) recorded 73 percent transfer in Shigellae isolated in Korea. Rotilu (1985) (unpublished) reported 89.5 percent transfer in fifty- seven isolates of Salmone 1 la. Shigella and £. 0 .0 1 i from this environment (Ibadan area). However, in vivo transfer of plasmid does not go c A on at this prolific rate due to the pH of the gut, oxidation-reduction .potentia1, volatile acids, antagonistic metabolites in the gut and presence of other bacteria among other Parameters (Watanabe, 1963). But one can safely assuine that transfer is relatively efficient between genetically related bacteria. 134 The accepted model for the transfer of R-factor by conjugation suggestcd that the donor bacterium made a temporary contact with recipient bacterium by means of specialized hair-like appendages or pilli through which one of the replicated R-factor is transfered to the recipient cell while the other is retained by ±thxe donor (Anderson, 1965). v X The molecular weights of These R-fva Sct/ors t encountered in the work were later determined 135 T AB L E 4 . 2B PREVALENCE OF ANTIBIOTIC RESISTANCE IN SHIGELLA AND SALMONELLA IN FAECAL SAMPLES OF DIARRHOEIC PATIENTS A Pattern of Resistance Salmonella Shigella Total %o ooff TIostoalla te T-CT-F-A-S-C-Te (7) 10 20 T-CT-F-A-S-Te (6) 3 10 T-CT-S-T-C (5) 8 T-CT-A-S-T-C ( 6 ) 4 8 CT 4CT--FS-S 4 44 88T-CF-F-S-C-Te US( 6 ) 1 2 4 CT (1) 2 4 CT-F-A-S 4 2 4 T-CT-F-S-Te 5 2<< 1 2 CT-F-A-S-Te-C 6 & 1 2 T-F-S-Te-C 5 1 2 CT-F-S-Te 4 1 2 CT-F-S-Te-C 1 2 CT-S-C-Te ^ 1 2 CT-F-A-S-C 5 1 2 T-CT-S-C-A-Te 6 1 2 CT-A-S 3 • 1 2 CT-S-C 3 1 2 CT-Te-S 3 2 4 Te 1 1 KEY: T = Trimetroprim Sulfamethoxazole; CT = Colistin sulphate; F = Nitrofurantion; S = Streptomycin; C = Chloramphenicol; Te = Tetracycline; A = Ampicillin. 136 TABLE 4.3A IN VITRO ACTIYITY OF ANTIBIOTICS AGAINST 30 SHIGELLA AND 22 SALMONELL/ Number of Isolates inhibited at different concentrationa of the antibiotics ug/ml V « • AMPICILLIN 137 TA ULI? 4.3b IN VITRO ACTIVITY OF ANTIBIOTICSAGAINST 30 Shigella Isolates Organisms (No. of Isolates Antibiotics Percentages of isolates with MIC (ug/ml) 1 2 4 8 16 32/» 128 >128 Shigella spp , Ampicillin 0 0 0 6.7 0 13.3 36.7 73.3 100 n = 30 Chloramph- 0 0 0 3.3 10.0 26.7 56.7 66.7 100 enicol Strepto­ 0 0 0 33.3 53.3 63.3 88.3 100mycin I Tetracyc­ 0 0 ?&.0 16.7 30.0 56.7 63.3 100 line H o J ' 138 Table 4 .3c INVITRO ACTIVITY OF ANTIBIOTICS AGAINST 22 Salmonella ISOLATES Organisms (No of Isolates) Antibiotics „Pe rcentage of, isolates with MICS S(u*jg/ml) 1 2 4 8 16 64 128 >128 Salmonella Ampicillin 0 18.2 36.4 40.9 ff.3 95.5 100 0 spp. Chloramph- enicol 0 0 22.7 50.0 68.2 72.7 86.4 90.9 100 n = 22 Strepto­ mycin 0 0 13.6 r27.3 63.6 95.5 100 0 0 Tetracy­ cline 0 13.6 36.4 77.3 95.5 100 0 0 Ä 4 ? / 139 TABLE 4.4a CONJUGATION: DETERMINANTS TRANSFERED ON MATING EACH DONOUR WITH E. COLI K 12 Nar 140 i n Resisttraanncsec opnhjeungoatnytpse of Isolate Identification No. AMP TE S C25 25 25 25 A 59 Salmonella spp. + 60 S. typhi + 64 T? VI . + 65 Salmonella spp. + + 66 S. typhi + r 67 Salmonella | + : + 42 isolates were screened. + = growth of trnnsconjugants on selection plate - = no growth of transconjugants oh selection plate < £ • 142 £ilAi?.TER fl VE IS.QLAT1QN AND CHARACTERI2ATI0N OF PLASMIDS IN SHIGELLA AND SALMONELLA 1S.QLATED FRQM DIARRHOEAL CASES INTRODUCION Plasmids are extrachromosomal genetic material found virtually in all bacterial species (Anderson and Threlfal. 1974). Plasmids har:bbou ried by members of th Enterobacteriaceae mediate the transfer of a variety of genetic determinants, including those of drug resistance, haemolysin and enterotoxin synthesis, colicinogeny, heavjfy metal tolerance, resistance to ultraviolet irradiation, carbohydrate ferraentation, hydrogen sulphide synthesis and other metabolic characters (Anderson and Threlfal, 1974). They have also been divided into thiry or more groups by method of compatibi 1ity characters (Jacoby and Swartz, 1980). cPsla.smids generally vary in size ranging from a ^ f e(w million to approximately 100 million daltons (Jacoby and Swartz, 1980). Those coding for resistance and virulence are known to be fairly large in size. The invasive ability of Shige1 1 a f 1 exner i. 143 has been shown to be due to possess ion of 140 megadalton plasmid (Sansonetti et al., 1982). Plasmid profile analysis has been useful as an epidemio1ogica 1 tool in investigating outbreaks of enteric disease (Riley and Cohen, 1982). When used as a finger-print for a strain, the plasmid profile may A A aid in differentiation of strains or identifying the source of infection (Taylor et al., 1982). Such differ entation may serve as a means of identifying related and unrelated Salmonella and Shigella. Thus in outbreaks in which there was a strong epidemiolo- gical association with a common exposure (e.g. a particular food or water) one would expect that Salmonel1a or Shige 11a which are resistant to many antibiotics would usually be the same genetically. However,p 1 asmid profile analysis often proved this assumption to be false (Holmberg et al., 1984). It has also been demonstrated that plasmid profile analysis is as specific as phage typing in identifying related samples and either method is clearly superior to 144 antimicrobial susceptibi 1ity testing (Holmberg et al., 1984). The acquisition of new plasmid may also 1ead to complete change of phage type. A case in point was a change from type 204 to type 193 by £. t.vphimur im implicated in bovine salmone 1 1 os i s in Britain (Willshaw et al., 1980). When first isolated in 1974 the organism was resistänt to su1phonamide and tetracycline but >.«e r acquired two more plasmids which coded for resistance to five more antibiotics with concomitant change in phage type. Over the years a number of methods have been evolved in the isolation and characterization of plasmids DNA. These methods involve three basic s t eps: (i) Growt. h of the bacteria in a suitable medium; (i i) Amp1ification of the plasmid; (iii) Harvesting and lysis of the bacteria and purification of the plasmid DNA. The general approach is to remove enzymatica 11y or physically any rigid cell wall and then to lyse the cell with a detergent usually SDS (Sodium deodysyl sulphate). Nucleases are inactivated an’d the DNA is then recovered by ethanol precipitation. 145 Purification methods involve preferential removal of long Strands of- DNA from the covalently closed circular strands of DNA. Determination of the plasmid DNA molecular weight is usually done by use of polyacri1amide gel e1 ectrophoresis followed by staining with ethidium bromide (Birnboin and Dolly, 1979). In this country there is little information on plasmid profile analysis of Shigellae and Salmonellae, associated with diarrhoea. Thus the aim of this present study is to: (i) isolate andfcharacterize the plasmid content of tho.se organisms with a view to comparing them with those encountered elsewhere. (ii) identify and characterize the antibiotic resistance (R) plasraids present in transcon- ugants obtained in Chapter 4. 146 MATERIALS AND METHODS Bfl.g-t.exia - L - is .p ia te s ; All the 53 bacterial isolates obtained from diarrhoeal cases were employed in this study. They comprised of 24 Shigella flexneri. 4. S .dysenteriae. 3. £.. hoydi i» 9 S..lyt>hi and JJL Salmonella spp. (Table 3.1). One of the isolates (&. f 1 exner i ) was obtained from diarrhoeic piglet. For the characterization of R plasmids, eleven of the transcönjugants obtained in Chapter 4 were employed.. These were carefully selected so that each of resistant determinant o O successful ly transfered was represented (Table 5.2).I An £. coli strain (V517) containing multilple plasmid obtained from Dr. Olukoya of Dept. of Genetics and Oncology, Nigeria Institute for Medical Research, Yaba, was used as size reference. Plasmid LNA isolation procedure;. This was carried out by the method of Birnboin and Dolly (1979)., but with certain modifications. Since the foremost objectives was to screen for the presence of plasmids, certain procedures seemed unnecessary. Treatment with RNase was omitted, since the concentration of NaOH used was 147 sufficient to remove RNA. As the phenol required re-disti11ation, Chloroform alone was used instead of the pheno1-chloroform mixture. Bacteria were grown overnight in Trioticase Soy Broth (TSB). One and a half millilitres of the !S $ ,h culture was poured into an Eppendorf tubi centrifuged at 8,000 x g for 2 mins. ^ T'hSe merdi.um was removed by aspiration and the bacterivalV pellet was resuspended in 100 ul of an ice-cold solution of 50mm glucose, 10mm Tris (ph 8.0). The mixture was held for 5 min. at room temperature hen 200 ul of freshly prepared 0.25N NaOH, 1% sodium dodecyl sulphate (SDS) were added respective1y . The tube was closed and the contents were mixed by inverting the tube rapidly two or three t imes. The tube was held on ice for 5 min. after which 150 ul of an ice-cold solution of potassium acetate S(p2H v4.8) was added. The tube was held on ice Iop min. and then centrifuged for an additional 5 .. 4 C. The supernatant was transfered to a clean tube and an equal volume of Chloroform was added. The contents were mixed on vortex mixer and then centrifuged for 2 min. The supernatant was transfered to a new tube and two volumes of 95% ethanol were added to precipitate the DNA 148 After mixing on a vortex rnixer the tube was held at room temperature for 2 min. The tube was then centrifuged for 5 min. at room temperature and then the supernatant was removed. The liquid in the tube was allowed to drain away by placing it in an inverted Position on a paper towel. One millilitre of 7035 ethanol was added after vortex. Mixing again briefly, the tube was centrifuged for 5 min. -«The supernatant was removed and the tube. was inverted to allow the pellet to dry. The pellet was resuspended in 50 ul of TE buffer (pH 8.0). # Agarose gel electrophc s i s o f BM L The procedure d< ibed by Meyers et.al (1976) was modified as follows: 0.7% agarose (supplied by Pharmacia, Sweden) was dissolve in Trisborate buffer (8.9mM) Tris base, 2.5MM disodium EDTA, and 8.9mM boric acid. A dye solution consisting of bromocresol blue (0.0735), SDS (735) and glycerol (3335) in water was added at 5 ul per sample to the DNA samples prior to e1 ectrophoresis. Electro- phoresis was carried out in vertical lucite slab gel apparatus. The dimension of the gel were 9.6 by 14.2 by 0.6cm. 149 Sample wells were made by use of lucite comb with 14 teeth, each 0.508cm wide and spaced by 0.478cm. The power source was a Heathkit regulated high voltage power supply, model IP-17, and e1ectrophorejssis; was carried out at 60mA,' 120V, for 2h or until the dy e neared the bottom of the gel. The gel was then strained in a solution of ethidium bromide in water (0.4ug/ml) for 15 min. Direct visualization of the DNA bands without removal of gels from glass tubes was made possible by illuminating the gels with a long wavelenght u. v. light (Black-Ray B-100A, ultraviolet products, Inc.). The gels were later removed from the glass tubes, i1luminated with a short-wave mineral light (uvs-54, ultraviolet Products Inc., Calif.) and photographed using type 57 film (ASA 3000) with a Polaroid mp-3 hand camera equiped with Wratten K2 and 25 filters. 150 RESULT Table 5.1 shows for each isolate, the number and size of different plasmids. It is seen from the table that most of the isolates contained more than one plasmid. Some of the Shigella isolates contained between eight and ten plasmids. One of the Salmonel1a isolates (No. 9) harboured nine plasmids while others contained between two and six plasmids per isolate. Altogether, a total of one hundred and thirty , plasmids were isolated from twenty-nine organisms and they belong to forty distinct types. By using plasmids of known molecular weights, the molecular weights of the plasmids isolated from the bacteria were determined to be within the ränge of 2.0 x 10& D 55.5 x 10*° D most of them however are less than 10 Daltons. Figure 5.1 (a & b) show the agarose gel electro- phoresis of R plasmids from the transconjugants. It revealed the presence of R plasmid as well as one to five other plasmids gained during conjugation (Table 5.2). The R plasmids ränge in size between 2.2 - 38 Mda1. The ampicillin resistance determinant (which all the isolate transfered) was carried on plasmid with 151 molecular weight of 13.3 Mdal. Others are Streptomycin 36, tetracycline 38 and ch1oramphenico1 4.0Mdal. The isolates showing triple resistance patterns carry plasmids raging in size between A 2.2-13.3 Mdal. < ? - 152 DISCUSSION The agarose gel eIecctrophoresis method for detecting covalently closed circular plasmid DNA and the estimation of plasmid mass is sensitive and does not require radio isotopes or ultracentrifugation. The method is simple and it employs readiily available reagents. In practice, ordinary bench centrifuge can be used for spinning to separate theScell wall ! materials for DNA, A "black and white" ordinary camera and roillimetre rule was used to record results. The method has been applied in the analysis of plasmid components of clinical isolates of £. coli. ]£. pnenmon i a . £. f reundi and a host of other bacteria (Meyers et. al, 1976 and Olukoya et. al. 1988 a, b). In the present study it was found to be effective in carrying out the plasmid profile survey of all the Salmonel1a and ShigelIa isolates screened. The migration of covalently closed circular (CCC) plasmid DNA were related to the molecular weights and single brands of DNA were obserVed for each plasmid » specie (Fig. 5.1 a & b). The molecular weights were found to ränge between 2.0 and 55.5 x 10^ daltons. Most of the plasmidshave their molecular weights below 20 megadaltons (Mdal). 153 The data presented in Tahle 5.1 also indicated that nearly all the Shigella isolates possess extremely small plasmids ranging from 2.0 - 3.0. Mdal in size. Tacket et al. (1984) investigated the plasmid profiles of 136 Shigel1a isolates twelve of which contain only small cryptic plasmids of low molecular w eight. Many of the isolates investigated in this wofk contain a number of plasmids which were common indicating that few Shigella clones account for Shigellosis in this country. This is in contrast to ie work of Tacket et. al (1984) who demonstrated that Shigellosis in Bangladesh patients was by large number of Shigel1a clones possessing a variety of distinct plasmids. It was also found in this work that the plasmid profile of isolate number 2 (£. f1exneri) recovered from piglet was identical with those isolated from human ces. This finding is in agreement with the work of Wilshaw et al. (1980) who demonstrated sirailar plasmid profile in epideraic strains £. t.vph imur i um isolated from man and animal sources. The phenomeon suggests that the Shigella isolated from diarrhoeic piglet must have been contacted from handlers. 154 Consistent absence of very large molecular weight plasmids (>55.5kb) in all the Shiare 1 1 a and SaImone 1 1 a isolates was noted in this work. Similar studies by Olukoya et.al (1988a) failed to demonstrate appreciable nuraber of large molecular weight plasmids in most of the strains Of enteric pathogens isolati n Lagos. However, the large plasmids have been associated with the enteroinvasive Shigella (Kopecho et al., 1980; Sansonetti et al., 1982 ; Tackette^al., 1984). In an earlier investigation using Sereny test (Sereny, 1957) four out of the fourteen Shigella isolates screened were found to be i invasive. They caused purulent keractoconjunctivities in guinea pig models, however subsequent plasraid profile studies fails to reveal any large plasmid in these invasive isolates# »’ .. . Laii c i- - ... ". Two reasons can be adduced for this: either the isolates do not harbouT these large plasmids or they have been lost during storage. It is known that loss of Shigella invasineness occur in storage in association with loss of large molecular weight plasmids (Kopecho et al., 1980; Sansonetti et al., 1982). The isolates 155 employed in this work were stored for lenght of time varying between 6 raonths to 2 yeaij. It could be assumed that they might have lost their large molecular weight plasmids. EighKt of, the nine Salmonella isolates ^screened contained between two and six plasmids. on 1 y exception was isolate number 9 with as many as nine plasmids. The isolate might have acquired the extra plasmids promiscously from other bacteria in in the environment. Acqui stiio n of new plasmids have been demonstrated in .£. typkimiuri um (Willshaw et al., 1980) leading to resistta.n„ce to more antibiotics. Two of the Salmonella isolates (65 and 67) carry three identical plasmids and hence are genetically related. This is suggestive of a common source of infection/in both patients from whom these isolates were obtained. When compared witli plasmids ‘ isolated from America by Holmberg et al. (1984) and Tacket et al. (1984) there is a ma'rked difference in the molecular weights of the plasmid DNA contents of the Salmonel1a and Shigella isolates. Those encountered in this work are of smaller size (ranging from 2.0 to 55.5 153 Mdal) whereas those in America are larger (ranging from 2.0 to 200Mdal. This difference may be due to the fact that different strains are responsible for enteric diseases in different communities. This also emphasizes the value of plasmid profile studies as an epidemiologica 1 tool in investigatind outbreaks of diarrhoea. The sizes of resistance (R) plasmids detected in this work were also fouhd to be small and Va ry between 2.2 and 13.3Mdal. The exception are tetracycline and Streptomycin R plasmids (Molecular weights 36 and 38Mdal respective1y ). Previous work by Olukoya et al. (1988b) ind icated a ränge of between 3.3 to 6.5Mdal for most determinats and 24Mdal for tetracycline resistance. Ana-Vincete and Da Alraeida (1984) also reported the presence of 36 Mdal R plasmid in Salmonel1a agona isolated in Rio-de-Janeiro. It thus appear that most R plasmids vary in size. Many are of small molecular weights while others are fai rly large in size. 157 Generally, plasmids confer resistance to raany antibiotics by a variety of inechanisms including coding for enzymes which modify or destroy such antibiotics. & / 158 TABLE 5.1 Number and size of different plasmids among Shigellae and Salmonella Isolates 159 61 2.5 5 S_. dysenteriac l 14 25.0 22 14.0 25 «j^.O 31 Q m 8-0 35 O 5.7 5.0 # 3.0 2.5 v 64 2.4 boydii 14 25.0 21 15.0 24 12.0 • 27 10.0 30 8.5 34 6.8 41 5.0 & 55 3.0 64 2.4<£ • 67 2.3 ' 7 44.0 7 # flexneri 3 8 12 29.024 12.0 32 7.5 55 3.0 < 5 64 3.4 71 2.2 76 2.0 19 S. flexneri 2 2 75 2.0 80 2.0 ------------------------- % . 160 20 S_. flexneri 6 4 23 13.0 61 2.5 71 2 . 2 78 2 . 21 _S. bovdii 3 25 35 J r 5 60 < % 6-:2.5 22 S. flexneri 6 3 22 14.0 73 2.0 80 2.0 26 S. dysenteriae 3 s 7 4 4012 29.0 62 2.5 72 2.1 76 2. 0 27 dvsenteriac 47 3.5 52 3.0 28 S. flexneri 2 53 3.0 30 S_. bovdii 30 8.5 32 7.5 40 5.0 51 3.1 32 jS. flexneri 2 6 10 34.0 25 12.0 30 8.5 41 5.2 61 2.5 70 2.2 161 1G2 163 Fi g . 5. Agaros e -̂ el e 1 ec t rophorese i s of R. plasmids (and otherj) transfered to co 1 i K,x Nar during conjugation. From the left, column 1-2, Amp; columns 3-4. Amp and Strep, columns 5-6, Amp and Tet, columns 7-8, Amp and Chi (See also Table 5.2) *O* Iolumn 9 C d l L-' pla•» sml ’ids ö f kA 'wn, s' 1.2«&2>.w(st&nda2?d) 164 -5 5 .5 cdal _36 .Q indal -'3.5 î dai4 A " * 7.4 adä^*'*’ - 5.6 - 5 . i . w i l mdal ^ *0.6 adal Fig. 5.1b Agarose gel e1 ectrophoresis of R plasmids (and othersJ) otra nsfered to JR̂ co) * K12 Na r duing conjugat ioi rom left column 1 E_. coli containing plasmids of known size (Standard) column 2-3, Amp- Strep-Tet, and column 4 Amp-Step-chl (See also Tab 1 e 5.2) 165 TABLE 5.2 ✓ PLASMID PROFILE’ OP TRANSCONJUGANTS Column on Plasmids (Mdal) Resistance R plasmid agarose JSä______ A 1 13.3, 36, 40 AMP 13.3 2 3.1, 7.4, 13.3, 36 13.3 3 2.8, 5.2, 7.4, 13.3, 36 Amp + Strep 13.3, 36 4 13.3, 36 Amp + Strep 13.3, 36 5 13.3, 38 Amp + tet 13.3, 38 6 13.3, 38 Amp + tet 13.3, 38 7 0.8, 3.1, 4.0 Amp + Chi 3.1, 40 8 3.1, 4.0, 7.4, 13.3, 36, 55.5 Amp + Chi 13.3, 3.1, 40 9 0. 8, 1.0, 3.3, 5.6, 13.1 36, 55.5 Standard 10 2.2, 3.1, 4.5, 13.3 Amp + Strept tet 13.3, 2.2, 3.1 11 2.2, 3.y ß . 6, 13.3 Amp + Strep + Tet 13.3, 2.2, 3.1 12 1. /T 2.2, 3.1, 5.6 Amp+Strep + Chi 2.2, 3.1 & 166 CHAPTER SIX V1RULENCE QF SHIGELLA SPEC1ES ISOLATED I * DlARRHOIEC CASES INTRODUCTION Shigella is a gram negative bacteri faraily EntSfobacteriacea. It causes a dysentery-1ike disease and dairrhoea referred to as Shigellosis. (Topley and Wilson, 1983). Shigellosis appears to be a two-organ disease; a jejunal fluid secretion caused by entcrotoxins (Formal et al., 1983) and acute bacterial dysentery (Keusch, 1978). The enteroti _ first described in 1903 and purified in culture filterate of Sh. d.vsent er i ae (Keusch et. al 1972a)^ £. flexneri and £. sonnei (Keusch and Jacewicz. , 1977). The toxin was found to cause histological alterations in the colonic mucosa as well as transudation of fluid in the i rabbit illeum (Keusch et al., 1972b). Its mechanism of action was found to be different from that of Vibrio cholerae and Escherichia coli in that it does not produce any marked increase in adenylate cyclase or 167 cyclic AMP (Flores et al.t 1974 Steinberg et al.,1975). It does not cause depletion of goblet cell mucus (Steinberg et al., 1975). Howev.er, like £. coli Aand V. cholerae enterotoxins, intestinal receptors have also been demonstrated for Shigella enterotoxins in rabbits (Bresson et. al, 1984; Fuch et al., 1986; Mobassaleh et al., 1988). The pathogesesis of Shigella infection has been . studied in other animal models. Starvation, opiates and Streptomycin pre'treatments have been used singly and in combination to compensate for the natural resistance of animals such as guinea-pigs, rats and mice to challenges with Shigellae (Grady and Keusch, 1971). However in the highly manipulated animals, the infection o differs from the usual clinical pattern of human disease and knowledge gained from such studies have been subject of controversy (Keusch et al., 1976). Rhesus monkeys (Branham et al., 1949) and human volunteers (DuPont et al., 1970; Levine et al., 1973) have also been used in the investiagation of the virulence of particular strains of Shigella. It is known that Shigella possess two potential pathogenic 168 modes of action. These are invasiveness and entero- toxigenticity. Levine et al. (1973) established that the primary virulence determinant of Shigella is the invasive capacity of the organism as strains which cannot penetrate and multiple within the colonic epithelial cells do not cause disease in humans. Among the procedures available . f lexner i . one &. d.vsenter i ae and one £. bo.vi i . The remaining twenty-four isolates only caused slight increased in th»e intestinal fluid volume in varying proportions (Table 6.2; and Figs. 6.2 and 6.3). In the >toslt s involving the he'at stable enterotoxins four out of the eight isoI*t?8 randomly selected r ec o»,rad,ed positive responses (Table 6.3). The four isolates comprises of three &. f 1 exner i and one S . bo.vdi i . One isolate, Shigel1a boydi i (No. 30) was found to produce heat labile and heat stable enterotoxins respectively (Table 6.2 and 6.3). Prominent histological changes were noticed in all the Segments studied. This generally revealed haemorr­ hage, hyperaemia, generalized necrosis of the mucosa, cellular infi1teration and oedema. LÜ-S-tog-ft t hg Lag-yi. V. cholerae +ve coniro 1_113.39_; Section of small intestined revealed degeneration of the mucosa and moderate amount of neutrophilic infilterati ons. S. flexneri 6 (+ve for Seren.v and tv.e. Ent e.rotpxin). The sections of the small intestine revealed mild glandular degeneration with moderate lymphocytic infilter .‘- T S . eria +ve for fluid accumulatioa (■EiiLerotox i - T’hi s section showed submucosal oedema and haemorrhage. There is also mild neutrophilic infilterate in the submucosa. S. bovdii +ve for fluid accumulation (En t ero tox ijcen i c ) This section of the intestine shows degeneration of the mucosa, submucosal, oedema and neutrophilic infiltrati ons. 17 C DISCUSSION In previous investigations conducted by Silva et al. 1982 involving fifty eight strains of Shige1j1_a>i twenty seven of thera were able to induce keratoconjunctivits while the remaining thirt[ y one were negative in the test. The relatively large number of avirulent isolates (Sereny negative) encountered in this study may be due to the fact^he isolates have been maintained on slants f f a i r 1 y long period (over six months) before being tested. Thus, they may have lost the plasmids enc for invasineness. f Recent evidences have demonstrated a high frequency of of spontaneous loss of high mole.cular weight plasmids coding for virulence in strains of Shige11a when ' they were maintained on stock medium for long periods (Sansonet t i J O l ., 1982; Silva et al., 1982; Takabashi et al., [n tÄis study six of the twenty-one Shige 11a isolates employed in the rabbit illeal loop ligation tes^^to assay for heat labile enterotoxin were found to produce significant fluid accumulation in the ligated intestinal loops of the rabbits. Four of these were 1 8 0 2- lljE&ne.ri , One £. d.vsenter iae and £. bovdi i (Table 6.2 and 6.3; Fig. 6.2 and 6.3). Previous workers have been able to demonstrate fluid accumulation in the ligated iluero of experimental rabbits (Keusch et at., 1972 and Moons et al., 1974). In the case of Shigellae, positive response has been limited to £. dvsenteriae and S.flexneri (Keusch et al. 2) and 5.. sonnei isolates (Keusch and Jecewicz, 1977). ShigeI1a bovdi i has not been reported to cause fluid accumulation in ligated illeal 1 Four of the eight isolates screened for heat stable toxin gave positive response in rabbit illeal loop test. There has been no previous report of heat stable toxin production by any of the Shigella species tested. Keusch e ‘X1 . (1972a) obtained a negative response when S-hiXgel1a toxin was heated for 30 min. at 90 C. This^^sult agreed with that obtainecf by Adetosoye x(1s98/1 ) (Unpublished data)% when £. coli enter Pto « n filterate heated at 99 C for 30 min. gave negative result in ST assay whereas when these filterates were heated at 65 C for 30 min. fifty-four out of 100 filterates produced positive result (Adetosoye et al., 1984). Thus it could be said that 65 C is the Optimum temperature for ST assay. 1 8 1 The li i s t opa t ho 1 og i ca 1 changes obscrved from ileal sections exposed to LT enterotoxin show that generally there was necrosis, haemorrhage and cellular infilter- ations (mostly neutrophils) of the lamina. Oedema of the submucosa was observed. This is in agreement with the work of previous investigators including Arms et al. 1965, Levine et. al. (1973) who found similar histological alterations. Keusch et al.(1972a) demonstrated that £. d.vsent er i ae 1 enterotoxin produce alterations and extrusion of epi theli al cel1s into the intestinal 1umen whrevn ‘inoculated into the ligated illeal loops of rabbits. These workers also found large numbers of transmigrating lymphocytes and considerable nuclei debris scattered throughout the lamin©. propria. Goblet cell depletion which is a special f eAture of V. cho1era enterotoxin was not encouni with the Sliige 11 a isolates employed in this study. Earlier investigators (Steinberg et al., 1975) also failed to demonstrate the depletion of goblet The mechanism by which diarrhoea is caused by Shigellae has always been a subject of controversy. It is hard to believe that the prominent necrosis and ulceration does not totally reflect an important feature in the overall diarrhoea syndrome (Grady and 1 8 2 Keusch, 1971). The question is whether these changes precede the mucosal demand for more fluid to excrete or are independent and caused by another mechanism. Studies of intestinal, perfusion done in monkeys infected with Shigel 1 a d.vsenteriae demonstrated that there were consistent transport abnormalies of salt and water occuring in the colon (Rout et al., 1975). The magnitude of this colonic absorption defects correlates with the degree of bacterial invasion of the small intestine. Fluid is secreted in the jejunum and diarrhoea is manifested when the colon is unable to absorb fluid entering it frora the small intestine (Formal et al., 1983). The absence of bacterial invasion of the colon suggests that enterotoxins may be responsible for the jejunal fluid secretion (Formal et al., 1983). Infact the argument in favour of bacterial invasion as a necessary Step in diarrhoea pathogenesis seems to have been mitigated. 1t has recently been learnt that non­ invasive but colonizing enteric pathogens such as enteropathogenic serotypes of E. coli (which do not produce eit her heat labile or heat stähle E. coli toxin) and strains of Vibrio cholerae deleted of genes 183 for both A and B subunits of cholera toxin, do cause diarrhoea and produce a toxin closely related to Shigella toxin (Levin et al . , 1983; O'Brien and La-Veck, 1983). Toxin binding studies have implicat ed t\ le presence of, d ̂eve1opmenta1 ly regul. ated toxin recigN.. 6.3: Ileal loop ligation test. C = Control organism (AL* cho 1 era Og. 19339). Nos 26-32 shows SU»gglJL& spp inoculated into each 10cm segment. C = Y- oho 1 era 26 and 30 are positive g . f 1 cxnerJ. 1 27 , 29 are negative ; ft . f 1 exner i ; 31 negative £. dvsent CT l &£ and 32 negative £. lumlll- 193 CHARTER SEVEN SUMMARY AND CQNCLUS1QN In this study, stool satnples from diarrhoeic patients attending outpatient clinics in three different hospitals in Ibadan were screened for aetiological agents of diarrhoea» such as Salmone1Ia and Shigella. The hospitals were: The University College Hospital and States Hospitals at Adeoyo and at Ring Road, Ibadan. Samples were also collected from diarrhoeic piglets at the Teaching and Research Farm, University of Ibadan. The latter were collected using sterile cotton wool sw„bs. Selenite F was used as an enrichment medium to enhance the isol ... on of Salmonella species while potassium tellur•itVe was added to MacConkey agar for the isolat>1oOn -irn Shigel la. Deoxychol,ate Citrate Agar (DCA) and MacConkey agar were employed as sei ec t i ve medi a. he biochemical characterization of the isolates was performed according to the method described by Edward and Ewing (1962) and Cowan and Steel (1974). The Shigellae were further subdivided into various i‘J4 serotypes with commercially prepared agg 1 u t i na t i ng sera. The Salmonellae were also classified into j>. typhi and Salmonella spp. The isolation frequencies of both Shige 11a and Salmone11a were generally low. However, this work established that Shigella organisms are more prevalent than SalmonelIa in human diarrhoe in this ronment. In this investigation 31 Shigella isolates and 22 Salmonel1a organisms were isolated. The distribution pattern of the serotype showed that S .f1exner i was the most frequent (24) followed by £. d.vs ent er i ae. (4) and £. bovdi i (3), £. sonnei was not isolated. One of the Shigellae was isolated from diarrhoeic piglet and was identified as £. fIexner i. The later did not show any unusual characteristic frora other £. f1exner i isolates. The piglet may have become infected through ingestion of feed or water contaminated b.v* Shigel la organismsV By comparing the number of different o speciel isolated in this work one can conclude that £. f1exner i is more prevalent than other serotypes in this environment 195 Ainong the Sa J mone 11a species encountercd in this i nves t i ga t i on S . t.vphi predominates on the average as one out of every three Salmonellae isolate^. Other Salmonella soecies apart from tvphoid hacilli . \ accounted for roughly two-thirds of the total number. They are all potential agents of diarrhoea in man and involves the animal reservoir. Their modae ofS trans­ mission may be through food (or water) in which multi­ plication usually takes place. In 557s country and other developing countries many lives are lost annually due to typhoid and other Salmone11a infections. This can be checked by Provision of good drinking water, better hygenic, living conditions and enforcement of public health control measures. The latter include prevention of suspected carriers from handling food stuffs meant färSsale to the public. Also effective immunization campaigns will serve to reduce the incidenc.e iqn typhoid fever. The antibiotic susceptibi 1ity of Shigellae and Salmonellae isolated from diarrhoeic human beings in this work was investiagated. The disc diffusion « ' as well as the Minimal Inhibitory Concentration (broth dilution) procedures were employed. With the disc diffusion method a total of twenty-one resistance patterns to the eight antimicrobial agents used for the tests were observed. Some of the iso l a t es were found to be resistant to four, five, s ix: and s > Infect. Immun. IQ.: 321-324 Adegoke, G. O. (1981). Characterization of’ St)aphy1ococci isolated from goats. I. Coagulase activities and antibiotic sensitivity patterns5. , Zbl. Bakt. 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Med. 133: 408-417. 250 APPENDIX I ANTIBIOTICS CONCENTRATION Ampicillin (Amp) 25 mcg Colistin Sulphate (CT) 10 " Naiit̂ idic acid (Na) 30"<- Nitrofurantion Compound (F) 200^^ Chloramphenicol (C) Streptomycin (S) ^ . 2 5 ■ Tetracycline (TE) 5 5 0 ■ Co-Trimoxazole (SXT) O / 25 " & & A 251 A p p e n d i x 2.b Scheme for bulk dilution of antibiotics in the macrobroth or agar dilution uscd in suscoptibility tosting (modifiod from Ericsson and Shcrris 1971). Conc. of ‘ vVo l,(ubm)e Sterile Total Intermediate Final conc. Tube antibiotics taken distilled Vol.water . conc. (ug/ml at 1/10 inNo. (ug/ml or (ml) (ml)added (ml) i.u/ml) agar plateu.i/ml) 1 2000 12.8 7.2 20 128 2 1280 3.0 3.0 6 1268400 64 3 1280 2.0 6.0 8 32 4 1280 2.0 14.0 16 16 5 160 3.0 3.0 6 8.0 6 160 2.0 6.0 40 4.0 7 160 2.0 14.0 J ? 20 2.0 , 8 20 3.0 3.0 ^ y 10 1.0 ,'V 9 20 2.0 0.1, 5 0.5 10 20 2.0 14.0 16 2.5 0.25 < / For agar plates take 5ml of intermediate conc. add 45ml molten agar cooled to 45-50 C; mix and pour two plates each to obtaim sensitivity agar with indicated final conc. a = initial stock antibiotic conc. prepared from power or ampoule. b = Volume of the stock conc. taken c = Volume of distilled water added to 'b' to obtain total volume. 252 TABLE 3.1 (APPENDIX 4.) BIOCHEMICAL CH AR ACTE RI STIC OF ISOLATES Sh. boydii 253 TABLE 3.1 (con td . ) n CO c 0d oa «3 • f i :G U \•Us ©c© G T3 © t-, ©u © ©u •©ß ■>o>1 X Xg o © 0) Ja c 0o) >4 ax Xc XG XG G •Q S F •GI’O .C j oa © © © © s £ F sr= SF CO CO £ F CÄO|G wJC|G äCO K CJ=O3| 10 16 17 18 19 20 21 22 Arabinose A Dulcitol Inositol l.actcse % Mallose c Mannitol - t[A/ J Ithamnose S> Sulicin Sorbitol Sucrose ' V l rehalose A Xylose I udole Voges Proskaur flexneri 254 TABLE 3.1 (Contd . ) % o co % r » u ua> u •H ■oo c C c < f-4£ X X X Cu 0c) >£o»l Lysine decarbonxy- lase Ornithine decarboxylase flexneri TABLE 3.1 (Contd.) Gram -ve, Straight rod Motility Growth in KCN medium Citrate as a C source Carbohydrate utili- zation Gas from glucose Acid from: Glucose Adonitol Arabinose Dulcitol Inositol ‘ 256 Lactose Maltose Mannitol Rhamnose Salicine Sorbitol Sucrose Trehalose Xylose Indole Voges Praskaur Urase Methyl red i i i i CtOo Sh.flexneri 6 to Sh. i i i i flexneri 3 to Sh i i i i CTi dysenteriae t-
    X , 00 1 I I I dysenteriae O to O3 i i i i ' 100 &fle xner^i 2 CtOo s h , J r C t7oI i i i i dysenteriae -O i Sh. boydiii i i 00 Sh. i i i i H» flexneri 6 0t0o Sh i i i i flexneri 2 oCoO Sh. J o - flexneri 2 00 Sh. V ' ' ' flexneri 2 oo Sh. , , , , CT> flexneri 2 00 Sh. 1 I I I flexneri 4 1 I I I _ c00o Shdysenteriae »2S • Arginine dehydrolase l.vsine decarboxylase "mithine decarbo­ xylase 258 < ? - TABLE 3.1 (contd .) i T fr* CO 0c) C0) C>>u OJ C OJ • X M X X >> I EoÄ 0) a> co C C q0) qa> Ul aS-SCL JL _LO -LCl -ca 45 46 48 49 11 12 13 15 52 _EL2_ -5-i Gram -ve, straight rod 5 ? Motility Catalase X: Growth in KCN medium Citrate as a C + souree $ Carbohydrate utili- A zation: Gas f«rom glucose $ Acid from: 9 6 Glucose AG A3 AG AG A AG AG Adonitol & Arabinose A A G AG AG AG AG AG Dulcitol * AG AG AG AG Inositol AG AG 259 TABLE 3.1 (Contd.) Cf ft f Ot CcOx t ft Q CfOt fCat S CDO tu < k u G> fatj fOtJ fDtJ cQJ # 'S Ul c-> >> >> o o c CfOt • ÖCJ cfot I X Caj E E Ecf X ot G«J Gm3 l C"cOö CO CO CO "CrOa CcO3 45 46 48 49 11 12 13 15 50 51 52 53 54 Lactose Maltose A-G AG AG AG AG AG AG AG AG Mannitol AG AG C b AG AG AG AG AG AG Uhaimose AG AG AG AG Sulicin Sorbitol AG AG AG AG AG AG Sucrose Trehalose A ) A G AG AG AG A G AG A G . AG„ AG Xylose AG AG AG AG A J C A AG AG Indole Urase Methyl red * II2 S % : DX X < t G ■'S CO aCO jC Xi c al >a>l CO DJ >> -OE Eo W| w’S —ai w cn 55 56 57 58 59 60 61 62 63 64 65 66- 67 Gram -ve, straight rod Motility Growth in KCN medium + Citrate as a C + source Carbohydrate utili- zation: + + Gas from glucose AG A > AG' A - A- AG A AG Acid from: Glucose AG AG AG AG Adonitol Arabim AG AG AG AG Dulcit AG AG AG AG In« ii ccn Salmonella n spp S. typhi 0cn5 Salmonella cn spp >HW V» ► **> J > > Salmonella M wo + i l l ° O i O> cn 1 ° ° o 1 oo spp W ts3 • 0to5 Salmonella cCn O O spp 3o > S. typhi & 1 > 1 ' > ' > 05 + 1 , 1 - 0 , , o 1 o S. typhi + 1 1 1 > O> ' I ' 1 > o> 1 f Salmonella t r i spp S. typhi C0O5 n A 05 s . H £ m K Salmonella c0n5 spp 8■4? S. typhi * Salmonella 05 spp o v + + + V V o v OV OV D\ OV o v V V ov o v Lactose Maltose A-G AG AG AG AG AG AG Mannitol AG A AG AG A AC AG Rhamnose AG AG AG Salicin Sorbitol AG AG AG AG AG Sucrose Trehalose AG AG AG AG AG AG X yloae AG AG AG A AG AG Voges Pioskaur Indole / > Urease - Methyl red + + + 1 S + + + ' + h 2s AG AG AG AG AG i + + uuii Salmonella spp S. typhi + + + Ucnl • v \ / cn Salmonella+ + + -«3 spp >H JSaÄlm. CO oYnella mf 0t5o i + + COs 1 spp CO Salmonella i + * + to ■> spp Oo3 + * S. typhio o; S. typhi • - W c Salmonellatno spp ' & * S. typhi ccon O S. typhii Salmonella 1 + + cUln spp cn S. typhi + + -t \cn • Salmonella 1 + + cn •* spp Arginine dehydro- lase Lysine decarboxy- läse Ornithine decarboxy- lase TABLE 4.2A APPENDIX 5 RESULTS OF ANTIBIOTIC SENSITIVITY TESTING OF O - 264 SALMONELLA AND SHIGELUA ISOLATES Co-Trimo Colistin Nalidixic. Nitrofu- Strepto­ Chloram- Tet Ampici­ xazole sulphate acid rantion mycin phenicol lin llin ISOLATE SXT 25 CT 10 Na 30 F 200 S 300 Chi. E. coli 10418 16mm 16mm 16mm 15 mm 16mm 16mm Sh. flexneri 6 R 6 R 16 S 8 R 6 R 6 R 6 ,R " 6 R 8 R 16 S 6 R 6 R 6 R 6 R 11 R 6 R 13 R 6 R R 6 R 10 R Sh. dysenteriae 9 R j F6 R 14 R 6 R 16 S 6 R 14 R 16 S 6 R 13 R 6 R $ 6 R 6 R 11 R s . flexneri 6 R 16 S 11 R 6 R : : 6 R 6 R 14 R s . flexneri 6 R 10 R 13 R 6 R 18 R 6 R 6 R 6 R 12 R 11 R 6 R 6 R 6 R 6 R 6 R 6 R 14 R 16 S 21 R 6 R 6 R 6 R 21 R 6 R 11 R 18 S 6 R 18 R 6 R 16 R 6 R 11 R 14 F < >17 S 6 R 6 R 6 R 17 S S. boydii 16 S 16 R 13 :F 9 R 6 R 17 S 8 R 14 S S. flexneri 13 R 6 R 14 R 18 R 6 R 6 R 6 R 6 R 6 R 9 R 14 R 10 R 6 R 6 R 9 R 6 R S. dysenteriae 14 R 13 R 14 R 16 R 6 R 6 R 6 R 6 R 6 R 6 R 16 S 11 R 6 R 14 R 9 R 6 R S. flexneri 6 R 6 R 13 R 11 R 6 R 6 S 6 R 6 R S. dysenteriae 6 r 12 R 18 S 6 R 6 R 9 R 6 R S. boydii R 13 R 10 R 6 R 11 16 S J * (i R R 2 G 6 i Co-Trimo Colistin Nalidixic Nitroiu- Strepto­ Chloram- Tetracyc­ Ampici- xazole sulphate acid . rantion mycin phenicol line u m ISOLATE S X T 25 CT 10 N a 30 F 200 S 300 Chi. TE 50 AMP 25 16mm 16mm 16mm 15mm 16 mm 16mm 13mm i/ ^14 m m 57. Salmonella spp 16 S 10 R 13 R 13 R 6 R 18 S 16 s 13 R 58. tt !! 6 R 6 R 11 R 11 R 6 R 20 S i 9 R 6 R 59. ?! tt 21 S 14 R 21 S 21 S 6 R 20 S R 18 S GÜ. S. typhi 16 S 14 R 11 R 16 S 6 R * 18 S V * \ 6 s 14 S 61 tt « tt 16 S 14 R 16 S 18 S 6 R 16 R 16 S 16 S 62. Salmonella spp 16 S 11 R 13 R 16 S 18 S 18 s 19 S 16 S 63. S. typhi 6 R 11 R 11 R 16 S 6 R 20 s 16 S 16 S 64. tt tt 16 S 11 R 14 R 16 S 6 119 s 17 S 16 S 65. Salmonella s p p 6 R 9 R 12 R 13 R 6 R 16 R 14 S 11 R 66. S. typhi 6 R 9 R 12 R 12 R 6 R 6 R 6 R e; R 67. Salmonella spp 16 R 9 R 12 R 11 R 6 R 6 R 6 R 6 R 0